EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018117 (Gene tree)
Gene ID: -
Gene Symbol: Gm12185
Alias: OTTMUSG00000005523|RP23-14F5.8
Full Name: predicted gene 12185
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 32119 bases
Position: chr11:48182757-48214875
Accession: 3652173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0028651	MMR_HSR1	PF01926.23	7.8e-17	1	2
MGP_LPJ_P0028651	MMR_HSR1	PF01926.23	7.8e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0028654	-	333	-	-	- (aa)	-	-
MGP_LPJ_T0028651	-	4554	-	MGP_LPJ_P0028651	741 (aa)	-	Q5NCB2

Gene Model

Click here to download MGP_LPJ_G0018117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018117	Gm12185	75	32.927	MGP_LPJ_G0018256	Igtp	71	33.065
MGP_LPJ_G0018117	Gm12185	75	36.000	MGP_LPJ_G0018257	Irgm2	74	36.000
MGP_LPJ_G0018117	Gm12185	80	37.855	MGP_LPJ_G0031731	Irgc1	70	37.855
MGP_LPJ_G0018117	Gm12185	76	37.209	MGP_LPJ_G0018115	Irgm1	86	38.554
MGP_LPJ_G0018117	Gm12185	90	90.884	MGP_LPJ_G0018116	Gm5431	77	90.884
MGP_LPJ_G0018117	Gm12185	85	45.609	MGP_LPJ_G0024376	Gm4951	89	46.707
MGP_LPJ_G0018117	Gm12185	88	52.299	MGP_LPJ_G0024377	F830016B08Rik	88	52.367
MGP_LPJ_G0018117	Gm12185	80	47.130	MGP_LPJ_G0018124	Ifi47	78	47.401
MGP_LPJ_G0018117	Gm12185	86	67.898	MGP_LPJ_G0018122	Tgtp1	83	68.035
MGP_LPJ_G0018117	Gm12185	86	67.898	MGP_LPJ_G0018123	Tgtp2	83	68.035