EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0018157 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 9637 bases
Position: chr11:49896536-49906172
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0028774	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_LPJ_P0028774	RRM_1	PF00076.22	2e-32	1	3
MGP_LPJ_P0028774	RRM_1	PF00076.22	2e-32	2	3
MGP_LPJ_P0028774	RRM_1	PF00076.22	2e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0028778	-	870	-	-	- (aa)	-	-
MGP_LPJ_T0028779	-	1116	-	-	- (aa)	-	-
MGP_LPJ_T0028776	-	581	-	-	- (aa)	-	-
MGP_LPJ_T0028777	-	3997	-	-	- (aa)	-	-
MGP_LPJ_T0028774	-	2530	XM_006533875	MGP_LPJ_P0028774	449 (aa)	XP_006533938	O35737
MGP_LPJ_T0028775	-	4080	-	-	- (aa)	-	-
MGP_LPJ_T0028786	-	159	-	-	- (aa)	-	-
MGP_LPJ_T0028785	-	163	-	-	- (aa)	-	-
MGP_LPJ_T0028784	-	582	-	-	- (aa)	-	-
MGP_LPJ_T0028783	-	832	-	-	- (aa)	-	-
MGP_LPJ_T0028782	-	1724	-	-	- (aa)	-	-
MGP_LPJ_T0028781	-	860	-	-	- (aa)	-	-
MGP_LPJ_T0028780	-	582	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018157	Hnrnph1	90	92.369	MGP_LPJ_G0035974	-	100	92.369
MGP_LPJ_G0018157	Hnrnph1	90	60.923	MGP_LPJ_G0017222	Hnrnph3	91	63.609
MGP_LPJ_G0018157	Hnrnph1	60	64.474	MGP_LPJ_G0029612	Grsf1	92	65.333