EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018163 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 14691 bases
Position: chr11:50440434-50455124
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_LPJ_P0028803	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_LPJ_P0028803	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0028803	-	1841	XM_006533208	MGP_LPJ_P0028803	536 (aa)	XP_006533271	Q5NCH5
MGP_LPJ_T0028804	-	579	-	-	- (aa)	-	-
MGP_LPJ_T0028805	-	722	-	MGP_LPJ_P0028805	122 (aa)	-	-
MGP_LPJ_T0028806	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018163	Zfp454	99	53.604	MGP_LPJ_G0021915	Zfp251	95	51.948
MGP_LPJ_G0018163	Zfp454	98	41.509	MGP_LPJ_G0033673	Zfp882	99	44.110
MGP_LPJ_G0018163	Zfp454	98	43.928	MGP_LPJ_G0026827	Zfp334	99	44.615
MGP_LPJ_G0018163	Zfp454	65	42.424	MGP_LPJ_G0028959	Zbtb17	55	43.322
MGP_LPJ_G0018163	Zfp454	99	44.019	MGP_LPJ_G0032952	E430018J23Rik	89	45.385
MGP_LPJ_G0018163	Zfp454	87	48.199	MGP_LPJ_G0032020	Zfp715	61	57.778
MGP_LPJ_G0018163	Zfp454	99	49.315	MGP_LPJ_G0023139	Zfp677	99	49.315
MGP_LPJ_G0018163	Zfp454	100	49.851	MGP_LPJ_G0023141	Zfp51	95	60.714
MGP_LPJ_G0018163	Zfp454	69	60.345	MGP_LPJ_G0031076	Zfp637	80	55.208
MGP_LPJ_G0018163	Zfp454	75	42.982	MGP_LPJ_G0024520	Zfp236	63	42.697
MGP_LPJ_G0018163	Zfp454	68	51.095	MGP_LPJ_G0032949	Zfp768	51	50.523
MGP_LPJ_G0018163	Zfp454	68	45.745	MGP_LPJ_G0026864	Zfp64	73	35.125
MGP_LPJ_G0018163	Zfp454	100	55.556	MGP_LPJ_G0026401	Zfp661	98	55.405
MGP_LPJ_G0018163	Zfp454	69	37.600	MGP_LPJ_G0033890	Zfp319	91	37.989
MGP_LPJ_G0018163	Zfp454	82	36.599	MGP_LPJ_G0030603	Repin1	92	35.252
MGP_LPJ_G0018163	Zfp454	76	53.448	MGP_LPJ_G0031725	Zfp61	59	66.667
MGP_LPJ_G0018163	Zfp454	98	50.523	MGP_LPJ_G0031726	Zfp94	97	50.523
MGP_LPJ_G0018163	Zfp454	98	50.836	MGP_LPJ_G0031724	Zfp108	99	50.836
MGP_LPJ_G0018163	Zfp454	98	48.828	MGP_LPJ_G0034047	Zfp1	99	48.828
MGP_LPJ_G0018163	Zfp454	86	48.601	MGP_LPJ_G0020604	Rslcan18	87	48.601
MGP_LPJ_G0018163	Zfp454	69	39.130	MGP_LPJ_G0018891	Zfp652	56	38.596
MGP_LPJ_G0018163	Zfp454	67	51.309	MGP_LPJ_G0031473	Zfp628	60	49.451
MGP_LPJ_G0018163	Zfp454	98	47.879	MGP_LPJ_G0018308	Zfp867	96	49.583
MGP_LPJ_G0018163	Zfp454	70	41.854	MGP_LPJ_G0023165	Zscan10	75	44.554
MGP_LPJ_G0018163	Zfp454	99	46.361	MGP_LPJ_G0023161	Zfp945	99	46.479
MGP_LPJ_G0018163	Zfp454	68	38.320	MGP_LPJ_G0018260	Zfp672	90	42.029
MGP_LPJ_G0018163	Zfp454	68	42.262	MGP_LPJ_G0029744	Gfi1	100	45.794
MGP_LPJ_G0018163	Zfp454	71	57.803	MGP_LPJ_G0031892	Zfp420	98	59.532
MGP_LPJ_G0018163	Zfp454	68	38.571	MGP_LPJ_G0030735	Prdm5	78	38.571
MGP_LPJ_G0018163	Zfp454	70	35.714	MGP_LPJ_G0031756	Zfp574	88	37.500
MGP_LPJ_G0018163	Zfp454	65	47.423	MGP_LPJ_G0029407	Zbtb49	63	50.000
MGP_LPJ_G0018163	Zfp454	98	49.008	MGP_LPJ_G0031719	Zfp112	72	57.143
MGP_LPJ_G0018163	Zfp454	65	36.493	MGP_LPJ_G0031484	Zfp784	71	36.493
MGP_LPJ_G0018163	Zfp454	67	42.623	MGP_LPJ_G0031481	Zfp865	80	36.486
MGP_LPJ_G0018163	Zfp454	66	48.148	MGP_LPJ_G0031482	-	68	36.486
MGP_LPJ_G0018163	Zfp454	98	51.136	MGP_LPJ_G0034316	Zfp26	89	51.136
MGP_LPJ_G0018163	Zfp454	99	50.565	MGP_LPJ_G0032013	2610021A01Rik	70	55.556
MGP_LPJ_G0018163	Zfp454	99	52.145	MGP_LPJ_G0032019	Zfp141	99	49.020
MGP_LPJ_G0018163	Zfp454	98	45.553	MGP_LPJ_G0020605	Zfp759	100	46.821
MGP_LPJ_G0018163	Zfp454	73	48.585	MGP_LPJ_G0031827	-	91	48.585