EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018253 (Gene tree)
Gene ID: -
Gene Symbol: Cnot8
Alias: 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059
Full Name: CCR4-NOT transcription complex%2C subunit 8
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 15733 bases
Position: chr11:58312922-58328654
Accession: 1916375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0029135	CAF1	PF04857.20	5.8e-23	1	2
MGP_LPJ_P0029135	CAF1	PF04857.20	5.8e-23	2	2
MGP_LPJ_P0029136	CAF1	PF04857.20	5.8e-23	1	2
MGP_LPJ_P0029136	CAF1	PF04857.20	5.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0029137	-	750	-	MGP_LPJ_P0029137	75 (aa)	-	-
MGP_LPJ_T0029136	-	2099	-	MGP_LPJ_P0029136	292 (aa)	-	-
MGP_LPJ_T0029135	-	2035	XM_006534102	MGP_LPJ_P0029135	292 (aa)	XP_006534165	Q9D8X5
MGP_LPJ_T0029138	-	231	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018253	Cnot8	97	76.596	MGP_LPJ_G0033462	Cnot7	99	76.596