EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018260 (Gene tree)
Gene ID: -
Gene Symbol: Zfp672
Alias: 4930488P06Rik|4930511N19Rik|Znf672
Full Name: zinc finger protein 672
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 15254 bases
Position: chr11:58552028-58567281
Accession: 2442105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_LPJ_P0029155	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_LPJ_P0029156	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	1	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	2	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	3	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	4	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	5	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	6	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	7	8
MGP_LPJ_P0029157	zf-C2H2	PF00096.26	1.2e-53	8	8
MGP_LPJ_P0029158	zf-C2H2	PF00096.26	2.6e-10	1	2
MGP_LPJ_P0029158	zf-C2H2	PF00096.26	2.6e-10	2	2
MGP_LPJ_P0029155	zf-met	PF12874.7	0.00069	1	1
MGP_LPJ_P0029156	zf-met	PF12874.7	0.00069	1	1
MGP_LPJ_P0029157	zf-met	PF12874.7	0.00069	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0029155	-	2764	XM_006533520	MGP_LPJ_P0029155	468 (aa)	XP_006533583	Q99LH4
MGP_LPJ_T0029157	-	3094	-	MGP_LPJ_P0029157	468 (aa)	-	-
MGP_LPJ_T0029156	-	2861	-	MGP_LPJ_P0029156	468 (aa)	-	-
MGP_LPJ_T0029159	-	839	-	MGP_LPJ_P0029159	55 (aa)	-	-
MGP_LPJ_T0029158	-	698	-	MGP_LPJ_P0029158	89 (aa)	-	-
MGP_LPJ_T0029160	-	426	-	-	- (aa)	-	-
MGP_LPJ_T0029161	-	423	-	-	- (aa)	-	-
MGP_LPJ_T0029162	-	3129	-	-	- (aa)	-	-
MGP_LPJ_T0029163	-	2624	-	MGP_LPJ_P0029163	117 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018260	Zfp672	96	42.254	MGP_LPJ_G0032020	Zfp715	71	38.835
MGP_LPJ_G0018260	Zfp672	89	49.524	MGP_LPJ_G0031892	Zfp420	98	49.524
MGP_LPJ_G0018260	Zfp672	99	41.250	MGP_LPJ_G0031724	Zfp108	69	46.352
MGP_LPJ_G0018260	Zfp672	94	40.580	MGP_LPJ_G0031827	-	89	41.463
MGP_LPJ_G0018260	Zfp672	90	38.750	MGP_LPJ_G0022449	Snai2	55	38.750
MGP_LPJ_G0018260	Zfp672	89	52.915	MGP_LPJ_G0032949	Zfp768	51	52.915
MGP_LPJ_G0018260	Zfp672	92	40.000	MGP_LPJ_G0023161	Zfp945	99	38.298
MGP_LPJ_G0018260	Zfp672	100	42.857	MGP_LPJ_G0023165	Zscan10	74	37.631
MGP_LPJ_G0018260	Zfp672	99	42.500	MGP_LPJ_G0026827	Zfp334	67	47.222
MGP_LPJ_G0018260	Zfp672	92	39.785	MGP_LPJ_G0031481	Zfp865	79	38.431
MGP_LPJ_G0018260	Zfp672	99	40.000	MGP_LPJ_G0023139	Zfp677	82	37.440
MGP_LPJ_G0018260	Zfp672	89	49.206	MGP_LPJ_G0031473	Zfp628	60	49.206
MGP_LPJ_G0018260	Zfp672	86	44.286	MGP_LPJ_G0030735	Prdm5	88	42.857
MGP_LPJ_G0018260	Zfp672	96	48.214	MGP_LPJ_G0029407	Zbtb49	78	47.143
MGP_LPJ_G0018260	Zfp672	93	42.500	MGP_LPJ_G0018308	Zfp867	92	47.449
MGP_LPJ_G0018260	Zfp672	93	44.156	MGP_LPJ_G0034316	Zfp26	79	42.476
MGP_LPJ_G0018260	Zfp672	96	41.096	MGP_LPJ_G0024520	Zfp236	78	36.471
MGP_LPJ_G0018260	Zfp672	93	38.462	MGP_LPJ_G0033890	Zfp319	91	32.410
MGP_LPJ_G0018260	Zfp672	90	42.029	MGP_LPJ_G0018163	Zfp454	68	38.320
MGP_LPJ_G0018260	Zfp672	90	46.559	MGP_LPJ_G0034047	Zfp1	67	46.559
MGP_LPJ_G0018260	Zfp672	92	41.250	MGP_LPJ_G0030603	Repin1	91	35.831
MGP_LPJ_G0018260	Zfp672	99	42.500	MGP_LPJ_G0031726	Zfp94	67	47.959
MGP_LPJ_G0018260	Zfp672	90	43.750	MGP_LPJ_G0031719	Zfp112	59	46.212
MGP_LPJ_G0018260	Zfp672	100	39.241	MGP_LPJ_G0020605	Zfp759	89	39.286
MGP_LPJ_G0018260	Zfp672	99	38.750	MGP_LPJ_G0020604	Rslcan18	65	45.247
MGP_LPJ_G0018260	Zfp672	90	40.000	MGP_LPJ_G0028959	Zbtb17	59	36.986
MGP_LPJ_G0018260	Zfp672	90	41.026	MGP_LPJ_G0033673	Zfp882	86	36.919
MGP_LPJ_G0018260	Zfp672	90	42.373	MGP_LPJ_G0023147	Gm10226	100	50.000
MGP_LPJ_G0018260	Zfp672	92	41.250	MGP_LPJ_G0023141	Zfp51	82	41.505
MGP_LPJ_G0018260	Zfp672	97	41.250	MGP_LPJ_G0031076	Zfp637	98	48.810
MGP_LPJ_G0018260	Zfp672	90	43.750	MGP_LPJ_G0032013	2610021A01Rik	56	43.041
MGP_LPJ_G0018260	Zfp672	94	43.860	MGP_LPJ_G0032019	Zfp141	63	47.809
MGP_LPJ_G0018260	Zfp672	100	38.554	MGP_LPJ_G0026401	Zfp661	63	42.910
MGP_LPJ_G0018260	Zfp672	90	48.276	MGP_LPJ_G0029744	Gfi1	100	48.276
MGP_LPJ_G0018260	Zfp672	93	41.509	MGP_LPJ_G0018891	Zfp652	52	37.931
MGP_LPJ_G0018260	Zfp672	92	42.857	MGP_LPJ_G0021915	Zfp251	69	46.372
MGP_LPJ_G0018260	Zfp672	93	43.662	MGP_LPJ_G0031756	Zfp574	93	41.667
MGP_LPJ_G0018260	Zfp672	89	41.951	MGP_LPJ_G0026864	Zfp64	73	38.806
MGP_LPJ_G0018260	Zfp672	90	42.105	MGP_LPJ_G0032952	E430018J23Rik	61	42.798