EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018302 (Gene tree)
Gene ID: -
Gene Symbol: Arf1
Alias: -
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 18987 bases
Position: chr11:59628634-59647620
Accession: 99431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0029250	MMR_HSR1	PF01926.23	2.5e-05	1	1
MGP_LPJ_P0029251	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0029250	-	1974	XM_011248681	MGP_LPJ_P0029250	181 (aa)	XP_011246983	P84078
MGP_LPJ_T0029251	-	1783	-	MGP_LPJ_P0029251	181 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018302	Arf1	96	33.871	MGP_LPJ_G0026952	Arfrp1	93	38.793
MGP_LPJ_G0018302	Arf1	92	46.386	MGP_LPJ_G0025140	Arl3	91	46.386
MGP_LPJ_G0018302	Arf1	91	43.529	MGP_LPJ_G0019111	Arl4d	85	43.529
MGP_LPJ_G0018302	Arf1	98	42.473	MGP_LPJ_G0019602	Arl4a	93	42.473
MGP_LPJ_G0018302	Arf1	76	33.333	MGP_LPJ_G0018185	Sar1b	69	33.333
MGP_LPJ_G0018302	Arf1	91	44.311	MGP_LPJ_G0027230	Arl14	87	44.311
MGP_LPJ_G0018302	Arf1	62	35.088	MGP_LPJ_G0020479	Arl10	55	35.088
MGP_LPJ_G0018302	Arf1	98	49.438	MGP_LPJ_G0025665	Arl5a	99	49.438
MGP_LPJ_G0018302	Arf1	100	96.133	MGP_LPJ_G0022209	Arf3	100	96.133
MGP_LPJ_G0018302	Arf1	100	95.580	MGP_LPJ_G0019172	Arf2	100	95.580
MGP_LPJ_G0018302	Arf1	92	57.831	MGP_LPJ_G0017545	Arl1	100	56.906
MGP_LPJ_G0018302	Arf1	96	31.609	MGP_LPJ_G0031001	Arl8b	94	31.609
MGP_LPJ_G0018302	Arf1	99	30.000	MGP_LPJ_G0016436	Arl8a	97	30.000
MGP_LPJ_G0018302	Arf1	98	81.921	MGP_LPJ_G0030413	Arf5	98	81.921
MGP_LPJ_G0018302	Arf1	96	41.341	MGP_LPJ_G0022836	Arl6	96	41.341
MGP_LPJ_G0018302	Arf1	98	50.282	MGP_LPJ_G0025296	Arl5b	98	50.282
MGP_LPJ_G0018302	Arf1	92	42.515	MGP_LPJ_G0021345	Arl11	95	42.515
MGP_LPJ_G0018302	Arf1	96	47.486	MGP_LPJ_G0016204	Arl4c	91	47.486
MGP_LPJ_G0018302	Arf1	92	46.386	MGP_LPJ_G0024670	Arl2	90	46.386