EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018491 (Gene tree)
Gene ID: -
Gene Symbol: Bcl6b
Alias: Bazf
Full Name: B cell CLL/lymphoma 6%2C member B
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr11:71314367-71320037
Accession: 1278332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0030134	zf-C2H2	PF00096.26	6.8e-16	1	2
MGP_LPJ_P0030134	zf-C2H2	PF00096.26	6.8e-16	2	2
MGP_LPJ_P0030134	zf-met	PF12874.7	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0030135	-	384	-	MGP_LPJ_P0030135	116 (aa)	-	-
MGP_LPJ_T0030134	-	3366	-	MGP_LPJ_P0030134	474 (aa)	-	O88282
MGP_LPJ_T0030136	-	652	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018491	Bcl6b	94	40.299	MGP_LPJ_G0017088	Zbtb24	71	37.640
MGP_LPJ_G0018491	Bcl6b	54	48.148	MGP_LPJ_G0020605	Zfp759	89	48.148
MGP_LPJ_G0018491	Bcl6b	93	41.121	MGP_LPJ_G0023906	Zbtb14	92	37.288
MGP_LPJ_G0018491	Bcl6b	96	52.713	MGP_LPJ_G0022590	Bcl6	69	52.756
MGP_LPJ_G0018491	Bcl6b	62	47.407	MGP_LPJ_G0023141	Zfp51	81	44.853
MGP_LPJ_G0018491	Bcl6b	97	34.483	MGP_LPJ_G0025625	Zbtb6	97	34.483
MGP_LPJ_G0018491	Bcl6b	56	49.645	MGP_LPJ_G0027059	Mynn	86	49.645
MGP_LPJ_G0018491	Bcl6b	82	38.739	MGP_LPJ_G0022728	Zbtb20	61	38.739
MGP_LPJ_G0018491	Bcl6b	96	32.692	MGP_LPJ_G0020879	Zfp131	50	36.667
MGP_LPJ_G0018491	Bcl6b	54	47.368	MGP_LPJ_G0029407	Zbtb49	60	45.714
MGP_LPJ_G0018491	Bcl6b	63	46.324	MGP_LPJ_G0023161	Zfp945	78	46.324
MGP_LPJ_G0018491	Bcl6b	68	45.312	MGP_LPJ_G0028959	Zbtb17	74	44.444