EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0030890	MMR_HSR1	PF01926.23	1.1e-06	1	1
MGP_LPJ_P0030887	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_LPJ_P0030888	MMR_HSR1	PF01926.23	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0030887	-	795	XM_011248824	MGP_LPJ_P0030887	265 (aa)	-	A0A140LIX7
MGP_LPJ_T0030889	-	420	-	-	- (aa)	-	-
MGP_LPJ_T0030888	-	1558	-	MGP_LPJ_P0030888	251 (aa)	-	-
MGP_LPJ_T0030892	-	352	-	-	- (aa)	-	-
MGP_LPJ_T0030890	-	1135	-	MGP_LPJ_P0030890	259 (aa)	-	-
MGP_LPJ_T0030891	-	879	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018671	Rab34	60	38.462	MGP_LPJ_G0015816	Rab23	64	38.462
MGP_LPJ_G0018671	Rab34	62	33.750	MGP_LPJ_G0026893	Rab22a	81	33.750
MGP_LPJ_G0018671	Rab34	64	35.928	MGP_LPJ_G0019767	Rab15	77	35.928
MGP_LPJ_G0018671	Rab34	60	36.306	MGP_LPJ_G0035754	Rab39b	73	36.306
MGP_LPJ_G0018671	Rab34	80	31.731	MGP_LPJ_G0019273	Rab37	89	31.731
MGP_LPJ_G0018671	Rab34	62	40.373	MGP_LPJ_G0024612	Rab1b	79	40.373
MGP_LPJ_G0018671	Rab34	62	40.491	MGP_LPJ_G0017974	Rab1a	77	40.491
MGP_LPJ_G0018671	Rab34	68	36.667	MGP_LPJ_G0035082	Rab6b	85	36.667
MGP_LPJ_G0018671	Rab34	62	32.500	MGP_LPJ_G0023797	Rab5a	73	32.500
MGP_LPJ_G0018671	Rab34	62	31.875	MGP_LPJ_G0019068	Rab5c	73	31.875
MGP_LPJ_G0018671	Rab34	61	30.519	MGP_LPJ_G0027336	Rab25	68	30.519
MGP_LPJ_G0018671	Rab34	60	37.179	MGP_LPJ_G0023888	Rab31	78	37.179
MGP_LPJ_G0018671	Rab34	86	58.559	MGP_LPJ_G0017261	Rab36	83	58.559
MGP_LPJ_G0018671	Rab34	62	35.000	MGP_LPJ_G0021198	Rab2b	78	35.714
MGP_LPJ_G0018671	Rab34	79	35.610	MGP_LPJ_G0029876	Rab35	96	35.610
MGP_LPJ_G0018671	Rab34	77	33.023	MGP_LPJ_G0023897	Rab12	73	33.023
MGP_LPJ_G0018671	Rab34	64	35.152	MGP_LPJ_G0027965	Rab2a	76	35.152
MGP_LPJ_G0018671	Rab34	71	33.514	MGP_LPJ_G0023444	Rab11b	78	34.426
MGP_LPJ_G0018671	Rab34	62	30.061	MGP_LPJ_G0031491	Rasl2-9	71	30.769
MGP_LPJ_G0018671	Rab34	53	41.135	MGP_LPJ_G0035583	Rab33a	59	41.135
MGP_LPJ_G0018671	Rab34	55	31.690	MGP_LPJ_G0029255	Rheb	73	31.690
MGP_LPJ_G0018671	Rab34	69	34.066	MGP_LPJ_G0025581	Rab14	89	39.855
MGP_LPJ_G0018671	Rab34	72	37.634	MGP_LPJ_G0032482	Rab6a	85	37.634
MGP_LPJ_G0018671	Rab34	62	35.625	MGP_LPJ_G0032422	Rab30	77	35.625