EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018809 (Gene tree)
Gene ID: -
Gene Symbol: Sept4
Alias: ARTS|Bh5|OTTMUSG00000001265|Pnutl2|cell division control-related protein 2b|septin H5
Full Name: septin 4
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 21750 bases
Position: chr11:89686998-89708747
Accession: 1270156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0031415	MMR_HSR1	PF01926.23	3.9e-07	1	1
MGP_LPJ_P0031420	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_LPJ_P0031417	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_LPJ_P0031411	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_LPJ_P0031416	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_LPJ_P0031408	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0031420	-	878	-	MGP_LPJ_P0031420	280 (aa)	-	-
MGP_LPJ_T0031421	-	560	-	-	- (aa)	-	-
MGP_LPJ_T0031422	-	845	-	-	- (aa)	-	-
MGP_LPJ_T0031423	-	535	-	-	- (aa)	-	-
MGP_LPJ_T0031415	-	759	-	MGP_LPJ_P0031415	232 (aa)	-	-
MGP_LPJ_T0031414	-	1354	-	-	- (aa)	-	-
MGP_LPJ_T0031417	-	1245	-	MGP_LPJ_P0031417	379 (aa)	-	-
MGP_LPJ_T0031416	-	1726	-	MGP_LPJ_P0031416	478 (aa)	-	-
MGP_LPJ_T0031411	-	1636	-	MGP_LPJ_P0031411	459 (aa)	-	-
MGP_LPJ_T0031410	-	1884	-	-	- (aa)	-	-
MGP_LPJ_T0031413	-	1449	-	-	- (aa)	-	-
MGP_LPJ_T0031412	-	1474	-	-	- (aa)	-	-
MGP_LPJ_T0031408	-	666	XM_006532496	MGP_LPJ_P0031408	213 (aa)	XP_006532559	P28661
MGP_LPJ_T0031409	-	900	-	-	- (aa)	-	-
MGP_LPJ_T0031419	-	2136	-	-	- (aa)	-	-
MGP_LPJ_T0031418	-	1252	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018809	Sept4	93	68.837	MGP_LPJ_G0016259	Sept2	100	65.421
MGP_LPJ_G0018809	Sept4	93	49.537	MGP_LPJ_G0022039	Sept3	92	49.682
MGP_LPJ_G0018809	Sept4	87	43.842	MGP_LPJ_G0018208	Sept8	66	43.878
MGP_LPJ_G0018809	Sept4	92	50.467	MGP_LPJ_G0019348	Sept9	81	52.551
MGP_LPJ_G0018809	Sept4	93	60.185	MGP_LPJ_G0034395	Sept7	70	59.091
MGP_LPJ_G0018809	Sept4	94	66.514	MGP_LPJ_G0032943	Sept1	100	66.897
MGP_LPJ_G0018809	Sept4	92	43.256	MGP_LPJ_G0022381	Sept12	84	42.446
MGP_LPJ_G0018809	Sept4	91	41.509	MGP_LPJ_G0017166	Sept10	67	43.878
MGP_LPJ_G0018809	Sept4	89	43.062	MGP_LPJ_G0035518	Sept6	69	43.390
MGP_LPJ_G0018809	Sept4	94	83.028	MGP_LPJ_G0022517	Sept5	97	76.359
MGP_LPJ_G0018809	Sept4	85	45.000	MGP_LPJ_G0029659	Sept11	67	43.878