EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018823 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:90243936-90250313
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0031476	RRM_1	PF00076.22	6.2e-34	1	2
MGP_LPJ_P0031476	RRM_1	PF00076.22	6.2e-34	2	2
MGP_LPJ_P0031475	RRM_1	PF00076.22	2.4e-33	1	2
MGP_LPJ_P0031475	RRM_1	PF00076.22	2.4e-33	2	2
MGP_LPJ_P0031478	RRM_1	PF00076.22	2.6e-33	1	2
MGP_LPJ_P0031478	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0031481	-	758	-	-	- (aa)	-	-
MGP_LPJ_T0031477	-	647	-	-	- (aa)	-	-
MGP_LPJ_T0031476	-	2948	-	MGP_LPJ_P0031476	201 (aa)	-	-
MGP_LPJ_T0031475	-	5357	-	MGP_LPJ_P0031475	248 (aa)	-	Q6PDM2
MGP_LPJ_T0031480	-	401	-	MGP_LPJ_P0031480	57 (aa)	-	-
MGP_LPJ_T0031478	-	1209	-	MGP_LPJ_P0031478	253 (aa)	-	-
MGP_LPJ_T0031479	-	895	-	MGP_LPJ_P0031479	105 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018823	Srsf1	82	42.857	MGP_LPJ_G0026748	Srsf6	58	40.670
MGP_LPJ_G0018823	Srsf1	79	79.762	MGP_LPJ_G0029866	Srsf9	78	70.330