EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018828 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 401824 bases
Position: chr11:90573670-90975493
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0031497	RRM_1	PF00076.22	6.3e-34	1	2
MGP_LPJ_P0031497	RRM_1	PF00076.22	6.3e-34	2	2
MGP_LPJ_P0031498	RRM_1	PF00076.22	6.5e-34	1	2
MGP_LPJ_P0031498	RRM_1	PF00076.22	6.5e-34	2	2
MGP_LPJ_P0031501	RRM_1	PF00076.22	3.9e-22	1	1
MGP_LPJ_P0031502	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0031499	-	1749	-	-	- (aa)	-	-
MGP_LPJ_T0031498	-	1857	-	MGP_LPJ_P0031498	346 (aa)	-	-
MGP_LPJ_T0031497	-	6349	XM_006534432	MGP_LPJ_P0031497	328 (aa)	XP_006534495	Q920Q6
MGP_LPJ_T0031503	-	627	-	-	- (aa)	-	-
MGP_LPJ_T0031502	-	666	-	MGP_LPJ_P0031502	157 (aa)	-	-
MGP_LPJ_T0031501	-	405	-	MGP_LPJ_P0031501	113 (aa)	-	-
MGP_LPJ_T0031500	-	2538	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018828	Msi2	80	34.074	MGP_LPJ_G0026886	Rbm38	70	38.095
MGP_LPJ_G0018828	Msi2	84	30.208	MGP_LPJ_G0028490	Elavl4	78	30.088
MGP_LPJ_G0018828	Msi2	100	90.323	MGP_LPJ_G0029870	Msi1	99	75.665
MGP_LPJ_G0018828	Msi2	61	41.429	MGP_LPJ_G0017398	Cirbp	88	43.243
MGP_LPJ_G0018828	Msi2	60	33.824	MGP_LPJ_G0019890	Slirp	70	33.824
MGP_LPJ_G0018828	Msi2	100	52.212	MGP_LPJ_G0018178	Hnrnpab	70	48.039
MGP_LPJ_G0018828	Msi2	100	53.982	MGP_LPJ_G0029681	Hnrnpd	87	58.025
MGP_LPJ_G0018828	Msi2	100	54.867	MGP_LPJ_G0029683	Hnrnpdl	78	41.634
MGP_LPJ_G0018828	Msi2	61	42.857	MGP_LPJ_G0035637	Rbmx	88	45.205
MGP_LPJ_G0018828	Msi2	100	35.398	MGP_LPJ_G0029032	Tardbp	66	34.247
MGP_LPJ_G0018828	Msi2	100	44.348	MGP_LPJ_G0030637	Hnrnpa2b1	56	48.193
MGP_LPJ_G0018828	Msi2	50	33.333	MGP_LPJ_G0015950	Boll	65	32.857
MGP_LPJ_G0018828	Msi2	61	42.857	MGP_LPJ_G0035427	Rbm3	82	43.243
MGP_LPJ_G0018828	Msi2	99	41.228	MGP_LPJ_G0020535	Hnrnpa0	59	41.989
MGP_LPJ_G0018828	Msi2	70	31.250	MGP_LPJ_G0028358	Elavl2	72	32.632
MGP_LPJ_G0018828	Msi2	99	42.400	MGP_LPJ_G0017404	Dazap1	92	49.462