EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0019068 (Gene tree)
Gene ID: -
Gene Symbol: Rab5c
Alias: AI326010|Rab5C|Rabl
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 27240 bases
Position: chr11:104042159-104069398
Accession: 105306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0032310	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0032313	-	441	-	MGP_LPJ_P0032313	34 (aa)	-	-
MGP_LPJ_T0032312	-	412	-	MGP_LPJ_P0032312	83 (aa)	-	-
MGP_LPJ_T0032311	-	1967	-	MGP_LPJ_P0032311	234 (aa)	-	-
MGP_LPJ_T0032310	-	1915	XM_006532586	MGP_LPJ_P0032310	216 (aa)	XP_006532649	P35278

Gene Model

Click here to download MGP_LPJ_G0019068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0019068	Rab5c	89	37.113	MGP_LPJ_G0029876	Rab35	96	37.436
MGP_LPJ_G0019068	Rab5c	89	41.089	MGP_LPJ_G0027336	Rab25	93	41.089
MGP_LPJ_G0019068	Rab5c	75	48.447	MGP_LPJ_G0023444	Rab11b	74	48.447
MGP_LPJ_G0019068	Rab5c	78	42.012	MGP_LPJ_G0032422	Rab30	83	42.012
MGP_LPJ_G0019068	Rab5c	94	41.379	MGP_LPJ_G0035082	Rab6b	98	41.379
MGP_LPJ_G0019068	Rab5c	93	37.379	MGP_LPJ_G0027136	Rab33b	89	37.379
MGP_LPJ_G0019068	Rab5c	75	36.585	MGP_LPJ_G0035754	Rab39b	77	36.585
MGP_LPJ_G0019068	Rab5c	77	42.442	MGP_LPJ_G0030901	Rab7	90	47.727
MGP_LPJ_G0019068	Rab5c	89	34.848	MGP_LPJ_G0036162	Rab9	97	34.848
MGP_LPJ_G0019068	Rab5c	81	33.702	MGP_LPJ_G0033130	Hras	94	33.702
MGP_LPJ_G0019068	Rab5c	81	44.000	MGP_LPJ_G0032482	Rab6a	84	44.000
MGP_LPJ_G0019068	Rab5c	90	38.974	MGP_LPJ_G0027965	Rab2a	92	38.974
MGP_LPJ_G0019068	Rab5c	90	41.262	MGP_LPJ_G0034839	Rab11a	88	49.630
MGP_LPJ_G0019068	Rab5c	89	40.206	MGP_LPJ_G0021198	Rab2b	90	40.206
MGP_LPJ_G0019068	Rab5c	90	47.423	MGP_LPJ_G0026893	Rab22a	98	47.423
MGP_LPJ_G0019068	Rab5c	98	40.845	MGP_LPJ_G0019273	Rab37	95	40.845
MGP_LPJ_G0019068	Rab5c	89	36.318	MGP_LPJ_G0035583	Rab33a	85	36.318
MGP_LPJ_G0019068	Rab5c	86	38.806	MGP_LPJ_G0023897	Rab12	75	36.000
MGP_LPJ_G0019068	Rab5c	75	45.062	MGP_LPJ_G0024045	Rab18	78	45.062
MGP_LPJ_G0019068	Rab5c	89	35.784	MGP_LPJ_G0019767	Rab15	95	35.784
MGP_LPJ_G0019068	Rab5c	86	39.785	MGP_LPJ_G0025581	Rab14	89	40.741
MGP_LPJ_G0019068	Rab5c	73	35.625	MGP_LPJ_G0017261	Rab36	60	35.625
MGP_LPJ_G0019068	Rab5c	89	44.330	MGP_LPJ_G0024612	Rab1b	96	44.330
MGP_LPJ_G0019068	Rab5c	91	46.939	MGP_LPJ_G0023888	Rab31	98	46.939
MGP_LPJ_G0019068	Rab5c	73	31.875	MGP_LPJ_G0018671	Rab34	62	31.875
MGP_LPJ_G0019068	Rab5c	71	35.948	MGP_LPJ_G0022141	Rabl2	67	35.948
MGP_LPJ_G0019068	Rab5c	100	87.500	MGP_LPJ_G0023797	Rab5a	100	87.500
MGP_LPJ_G0019068	Rab5c	55	31.707	MGP_LPJ_G0016436	Arl8a	62	31.707
MGP_LPJ_G0019068	Rab5c	81	35.227	MGP_LPJ_G0015816	Rab23	74	35.227
MGP_LPJ_G0019068	Rab5c	78	32.544	MGP_LPJ_G0031491	Rasl2-9	77	32.544
MGP_LPJ_G0019068	Rab5c	89	43.590	MGP_LPJ_G0017974	Rab1a	95	43.590
MGP_LPJ_G0019068	Rab5c	55	31.967	MGP_LPJ_G0031001	Arl8b	62	31.967
MGP_LPJ_G0019068	Rab5c	89	35.859	MGP_LPJ_G0036012	Rab9b	97	35.859
MGP_LPJ_G0019068	Rab5c	83	30.000	MGP_LPJ_G0027615	Nras	99	33.333
MGP_LPJ_G0019068	Rab5c	81	31.250	MGP_LPJ_G0029255	Rheb	93	31.250
MGP_LPJ_G0019068	Rab5c	78	32.544	MGP_LPJ_G0031384	Kras	98	30.102