EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0019215 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 8949 bases
Position: chr11:110565127-110574075
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0033014	P68HR	PF08061.11	8.2e-07	1	1
MGP_LPJ_P0033014	DEAD	PF00270.29	2.3e-47	1	1
MGP_LPJ_P0033021	DEAD	PF00270.29	1.5e-15	1	1
MGP_LPJ_P0033022	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0033017	-	714	-	MGP_LPJ_P0033017	71 (aa)	-	-
MGP_LPJ_T0033016	-	570	-	-	- (aa)	-	-
MGP_LPJ_T0033015	-	3181	-	MGP_LPJ_P0033015	406 (aa)	-	-
MGP_LPJ_T0033014	-	3139	XM_006532135	MGP_LPJ_P0033014	519 (aa)	XP_006532198	B1ARB9
MGP_LPJ_T0033019	-	708	-	-	- (aa)	-	-
MGP_LPJ_T0033018	-	496	-	-	- (aa)	-	-
MGP_LPJ_T0033021	-	861	-	MGP_LPJ_P0033021	182 (aa)	-	-
MGP_LPJ_T0033020	-	810	-	-	- (aa)	-	-
MGP_LPJ_T0033022	-	831	-	MGP_LPJ_P0033022	167 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0019215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0019215	Ddx5	71	37.457	MGP_LPJ_G0031317	Ddx47	80	37.389
MGP_LPJ_G0019215	Ddx5	80	42.522	MGP_LPJ_G0035462	Ddx3x	61	43.276
MGP_LPJ_G0019215	Ddx5	76	31.204	MGP_LPJ_G0018766	Ddx52	66	31.204
MGP_LPJ_G0019215	Ddx5	81	42.105	MGP_LPJ_G0016837	D1Pas1	61	43.032
MGP_LPJ_G0019215	Ddx5	89	45.040	MGP_LPJ_G0034961	Ddx43	68	44.519
MGP_LPJ_G0019215	Ddx5	54	31.111	MGP_LPJ_G0019381	Gm8994	78	31.004
MGP_LPJ_G0019215	Ddx5	76	34.062	MGP_LPJ_G0033607	Ddx49	97	35.211
MGP_LPJ_G0019215	Ddx5	80	38.922	MGP_LPJ_G0020838	Ddx4	57	39.012
MGP_LPJ_G0019215	Ddx5	81	38.235	MGP_LPJ_G0020510	Ddx41	64	39.163
MGP_LPJ_G0019215	Ddx5	81	36.389	MGP_LPJ_G0022205	Ddx23	50	37.915
MGP_LPJ_G0019215	Ddx5	72	33.110	MGP_LPJ_G0019380	Eif4a3	82	34.857
MGP_LPJ_G0019215	Ddx5	54	31.111	MGP_LPJ_G0019382	Gm5580	78	31.004
MGP_LPJ_G0019215	Ddx5	72	30.070	MGP_LPJ_G0025464	Ddx31	56	31.313
MGP_LPJ_G0019215	Ddx5	73	31.148	MGP_LPJ_G0034434	Ddx25	73	32.425
MGP_LPJ_G0019215	Ddx5	86	30.857	MGP_LPJ_G0016460	Ddx59	65	31.415
MGP_LPJ_G0019215	Ddx5	65	30.029	MGP_LPJ_G0023543	Ddx39b	77	30.029
MGP_LPJ_G0019215	Ddx5	66	30.137	MGP_LPJ_G0030002	Ddx55	57	30.137
MGP_LPJ_G0019215	Ddx5	93	83.598	MGP_LPJ_G0021977	Ddx17	72	82.241
MGP_LPJ_G0019215	Ddx5	78	32.110	MGP_LPJ_G0022580	Eif4a2	92	33.714