EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0019348 (Gene tree)
Gene ID: -
Gene Symbol: Sept9
Alias: Kiaa0991|MSF1|Msf|PNUTL4|SL3-3 integration site 1|Sint1
Full Name: septin 9
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 185117 bases
Position: chr11:121747330-121932446
Accession: 1858222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0033692	MMR_HSR1	PF01926.23	1.3e-09	1	1
MGP_LPJ_P0033689	MMR_HSR1	PF01926.23	5.9e-09	1	1
MGP_LPJ_P0033690	MMR_HSR1	PF01926.23	6.1e-09	1	1
MGP_LPJ_P0033688	MMR_HSR1	PF01926.23	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0033688	-	3619	XM_006533744	MGP_LPJ_P0033688	583 (aa)	XP_006533807	Q80UG5
MGP_LPJ_T0033689	-	3872	-	MGP_LPJ_P0033689	565 (aa)	-	-
MGP_LPJ_T0033691	-	374	-	MGP_LPJ_P0033691	74 (aa)	-	-
MGP_LPJ_T0033690	-	3499	-	MGP_LPJ_P0033690	576 (aa)	-	-
MGP_LPJ_T0033693	-	4863	-	-	- (aa)	-	-
MGP_LPJ_T0033692	-	778	-	MGP_LPJ_P0033692	242 (aa)	-	-
MGP_LPJ_T0033695	-	555	-	-	- (aa)	-	-
MGP_LPJ_T0033694	-	647	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0019348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0019348	Sept9	83	46.000	MGP_LPJ_G0032943	Sept1	100	50.000
MGP_LPJ_G0019348	Sept9	82	64.322	MGP_LPJ_G0022381	Sept12	78	65.462
MGP_LPJ_G0019348	Sept9	88	49.767	MGP_LPJ_G0016259	Sept2	100	49.778
MGP_LPJ_G0019348	Sept9	88	49.057	MGP_LPJ_G0022517	Sept5	85	45.860
MGP_LPJ_G0019348	Sept9	81	46.970	MGP_LPJ_G0029659	Sept11	67	42.953
MGP_LPJ_G0019348	Sept9	81	46.970	MGP_LPJ_G0035518	Sept6	99	36.552
MGP_LPJ_G0019348	Sept9	81	44.949	MGP_LPJ_G0017166	Sept10	67	43.836
MGP_LPJ_G0019348	Sept9	81	45.455	MGP_LPJ_G0018208	Sept8	68	42.000
MGP_LPJ_G0019348	Sept9	81	51.269	MGP_LPJ_G0034395	Sept7	68	49.502
MGP_LPJ_G0019348	Sept9	82	75.377	MGP_LPJ_G0022039	Sept3	87	73.720
MGP_LPJ_G0019348	Sept9	81	52.551	MGP_LPJ_G0018809	Sept4	92	50.467