EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_LPJ_G0019372 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_lpj
Status
putative
Strand
Minus strand
Length
434422 bases
Position
chr11:123137534-123571955
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_LPJ_P0033796Fox-1_CPF12414.82.3e-4511
MGP_LPJ_P0033799Fox-1_CPF12414.82.3e-4511
MGP_LPJ_P0033800Fox-1_CPF12414.82.3e-4511
MGP_LPJ_P0033797Fox-1_CPF12414.82.4e-4111
MGP_LPJ_P0033798Fox-1_CPF12414.82.5e-4111
MGP_LPJ_P0033795Fox-1_CPF12414.82.9e-4111
MGP_LPJ_P0033801Fox-1_CPF12414.81.6e-2111
MGP_LPJ_P0033802RRM_1PF00076.223.1e-1911
MGP_LPJ_P0033796RRM_1PF00076.221.5e-1811
MGP_LPJ_P0033799RRM_1PF00076.221.5e-1811
MGP_LPJ_P0033800RRM_1PF00076.221.7e-1811
MGP_LPJ_P0033795RRM_1PF00076.221.9e-1811
MGP_LPJ_P0033798RRM_1PF00076.222.1e-1811
MGP_LPJ_P0033801RRM_1PF00076.221.9e-1411
MGP_LPJ_P0033797RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_LPJ_T0033800-2150-MGP_LPJ_P0033800327 (aa)--
MGP_LPJ_T0033801-710-MGP_LPJ_P0033801145 (aa)--
MGP_LPJ_T0033802-900-MGP_LPJ_P0033802169 (aa)--
MGP_LPJ_T0033803-301--- (aa)--
MGP_LPJ_T0033804-369--- (aa)--
MGP_LPJ_T0033795-3084XM_006533722MGP_LPJ_P0033795360 (aa)XP_006533785Q8BIF2
MGP_LPJ_T0033796-2809-MGP_LPJ_P0033796313 (aa)--
MGP_LPJ_T0033797-1553-MGP_LPJ_P0033797329 (aa)--
MGP_LPJ_T0033798-3140-MGP_LPJ_P0033798374 (aa)--
MGP_LPJ_T0033799-1542-MGP_LPJ_P0033799313 (aa)--
Gene Model
Click here to download MGP_LPJ_G0019372's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019372's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_LPJ_G0019372Rbfox39961.932MGP_LPJ_G0021923Rbfox29161.972
MGP_LPJ_G0019372Rbfox310071.930MGP_LPJ_G0022392Rbfox19165.123
MGP_LPJ_G0019372Rbfox37231.429MGP_LPJ_G0015950Boll5043.939
MGP_LPJ_G0019372Rbfox35331.868MGP_LPJ_G0032999Tial18131.111

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