EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0019382 (Gene tree)
Gene ID: -
Gene Symbol: Gm5580
Alias: -
Full Name: predicted pseudogene 5580
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 6945 bases
Position: chr11:123983320-123990264
Accession: 3646594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0033840	DEAD	PF00270.29	1.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0033840	-	936	-	MGP_LPJ_P0033840	273 (aa)	-	A0A0N4SVP8

Gene Model

Click here to download MGP_LPJ_G0019382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0019382	Gm5580	78	37.327	MGP_LPJ_G0023543	Ddx39b	50	37.327
MGP_LPJ_G0019382	Gm5580	87	61.538	MGP_LPJ_G0022580	Eif4a2	72	61.538
MGP_LPJ_G0019382	Gm5580	76	30.769	MGP_LPJ_G0031317	Ddx47	50	31.667
MGP_LPJ_G0019382	Gm5580	78	35.484	MGP_LPJ_G0034434	Ddx25	54	33.588
MGP_LPJ_G0019382	Gm5580	99	91.126	MGP_LPJ_G0019380	Eif4a3	90	84.483
MGP_LPJ_G0019382	Gm5580	100	100.000	MGP_LPJ_G0019381	Gm8994	100	100.000
MGP_LPJ_G0019382	Gm5580	78	36.866	MGP_LPJ_G0033746	Ddx39	56	39.655
MGP_LPJ_G0019382	Gm5580	86	34.100	MGP_LPJ_G0034035	Ddx19a	54	34.100
MGP_LPJ_G0019382	Gm5580	78	31.004	MGP_LPJ_G0019215	Ddx5	54	31.111