EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0019890 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 6008 bases
Position: chr12:88231054-88237061
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0035470	RRM_1	PF00076.22	4.1e-14	1	1
MGP_LPJ_P0035469	RRM_1	PF00076.22	8.8e-14	1	1
MGP_LPJ_P0035471	RRM_1	PF00076.22	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0035469	-	802	-	MGP_LPJ_P0035469	99 (aa)	-	Q9D8T7
MGP_LPJ_T0035471	-	335	-	MGP_LPJ_P0035471	102 (aa)	-	-
MGP_LPJ_T0035470	-	385	-	MGP_LPJ_P0035470	112 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0019890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0019890	Slirp	73	33.846	MGP_LPJ_G0018178	Hnrnpab	51	33.846
MGP_LPJ_G0019890	Slirp	70	33.824	MGP_LPJ_G0018828	Msi2	60	33.824
MGP_LPJ_G0019890	Slirp	78	33.846	MGP_LPJ_G0017404	Dazap1	89	33.846