EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0020577 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 90106 bases
Position: chr13:64086708-64176813
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0037299	ResIII	PF04851.15	1.5e-11	1	1
MGP_LPJ_P0037302	ResIII	PF04851.15	1.9e-11	1	1
MGP_LPJ_P0037298	ResIII	PF04851.15	2e-11	1	1
MGP_LPJ_P0037296	ResIII	PF04851.15	1.1e-10	1	1
MGP_LPJ_P0037301	ResIII	PF04851.15	1.3e-10	1	1
MGP_LPJ_P0037295	ResIII	PF04851.15	8.3e-10	1	1
MGP_LPJ_P0037299	DEAD	PF00270.29	3.5e-07	1	1
MGP_LPJ_P0037301	DEAD	PF00270.29	4.1e-07	1	1
MGP_LPJ_P0037302	DEAD	PF00270.29	5.2e-07	1	1
MGP_LPJ_P0037298	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0037299	-	1888	-	MGP_LPJ_P0037299	582 (aa)	-	-
MGP_LPJ_T0037298	-	2693	-	MGP_LPJ_P0037298	699 (aa)	-	-
MGP_LPJ_T0037305	-	2579	-	MGP_LPJ_P0037305	592 (aa)	-	-
MGP_LPJ_T0037304	-	975	-	-	- (aa)	-	-
MGP_LPJ_T0037303	-	759	-	MGP_LPJ_P0037303	152 (aa)	-	-
MGP_LPJ_T0037302	-	2530	-	MGP_LPJ_P0037302	684 (aa)	-	-
MGP_LPJ_T0037301	-	1726	-	MGP_LPJ_P0037301	574 (aa)	-	-
MGP_LPJ_T0037300	-	1961	-	MGP_LPJ_P0037300	191 (aa)	-	-
MGP_LPJ_T0037295	-	1592	-	MGP_LPJ_P0037295	467 (aa)	-	Q9JIM3
MGP_LPJ_T0037297	-	1820	-	-	- (aa)	-	-
MGP_LPJ_T0037296	-	3436	-	MGP_LPJ_P0037296	842 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0020577	Ercc6l2	81	30.021	MGP_LPJ_G0027568	Chd1l	50	32.657
MGP_LPJ_G0020577	Ercc6l2	82	30.353	MGP_LPJ_G0035573	Smarca1	71	30.490