EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0020838 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 59125 bases
Position: chr13:115209346-115268470
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0038069	DEAD	PF00270.29	4.5e-49	1	1
MGP_LPJ_P0038070	DEAD	PF00270.29	4.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0038070	-	2848	-	MGP_LPJ_P0038070	728 (aa)	-	-
MGP_LPJ_T0038069	-	2770	XM_006517524	MGP_LPJ_P0038069	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_LPJ_G0020838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0020838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0020838	Ddx4	52	33.687	MGP_LPJ_G0033607	Ddx49	95	33.616
MGP_LPJ_G0020838	Ddx4	54	30.326	MGP_LPJ_G0034434	Ddx25	80	30.488
MGP_LPJ_G0020838	Ddx4	67	50.513	MGP_LPJ_G0035462	Ddx3x	69	51.528
MGP_LPJ_G0020838	Ddx4	56	34.271	MGP_LPJ_G0031317	Ddx47	93	33.760
MGP_LPJ_G0020838	Ddx4	62	52.596	MGP_LPJ_G0016837	D1Pas1	71	49.578
MGP_LPJ_G0020838	Ddx4	57	39.163	MGP_LPJ_G0021977	Ddx17	61	39.163
MGP_LPJ_G0020838	Ddx4	57	38.519	MGP_LPJ_G0020510	Ddx41	64	38.519
MGP_LPJ_G0020838	Ddx4	57	34.069	MGP_LPJ_G0018766	Ddx52	66	34.069
MGP_LPJ_G0020838	Ddx4	51	30.343	MGP_LPJ_G0034035	Ddx19a	75	30.343
MGP_LPJ_G0020838	Ddx4	56	30.691	MGP_LPJ_G0019380	Eif4a3	90	30.691
MGP_LPJ_G0020838	Ddx4	56	40.000	MGP_LPJ_G0034961	Ddx43	60	40.000
MGP_LPJ_G0020838	Ddx4	53	35.789	MGP_LPJ_G0016460	Ddx59	57	35.789
MGP_LPJ_G0020838	Ddx4	57	39.012	MGP_LPJ_G0019215	Ddx5	80	38.922