EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_LPJ_G0021989 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_lpj
Status
putative
Strand
Plus strand
Length
24126 bases
Position
chr15:80374258-80398383
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_LPJ_P0041585APOBEC_NPF08210.112.6e-7912
MGP_LPJ_P0041585APOBEC_NPF08210.112.6e-7922
MGP_LPJ_P0041582APOBEC_NPF08210.113.3e-7912
MGP_LPJ_P0041582APOBEC_NPF08210.113.3e-7922
MGP_LPJ_P0041586APOBEC_NPF08210.113.3e-7912
MGP_LPJ_P0041586APOBEC_NPF08210.113.3e-7922
MGP_LPJ_P0041588APOBEC_NPF08210.113.6e-7912
MGP_LPJ_P0041588APOBEC_NPF08210.113.6e-7922
MGP_LPJ_P0041580APOBEC_NPF08210.112.6e-2611
MGP_LPJ_P0041579APOBEC_NPF08210.117.6e-2611
MGP_LPJ_P0041589APOBEC_NPF08210.118.7e-2411
MGP_LPJ_P0041585APOBEC_CPF05240.147.7e-5412
MGP_LPJ_P0041585APOBEC_CPF05240.147.7e-5422
MGP_LPJ_P0041582APOBEC_CPF05240.141.2e-5312
MGP_LPJ_P0041582APOBEC_CPF05240.141.2e-5322
MGP_LPJ_P0041586APOBEC_CPF05240.141.3e-5312
MGP_LPJ_P0041586APOBEC_CPF05240.141.3e-5322
MGP_LPJ_P0041588APOBEC_CPF05240.141.5e-5312
MGP_LPJ_P0041588APOBEC_CPF05240.141.5e-5322
MGP_LPJ_P0041579APOBEC_CPF05240.144.4e-2811
MGP_LPJ_P0041580APOBEC_CPF05240.145.2e-2811
MGP_LPJ_P0041589APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_LPJ_T0041584-1217-MGP_LPJ_P004158446 (aa)--
MGP_LPJ_T0041591-2082--- (aa)--
MGP_LPJ_T0041590-731--- (aa)--
MGP_LPJ_T0041579-750XM_006521551MGP_LPJ_P0041579166 (aa)XP_006521614Q99J72
MGP_LPJ_T0041585-1980-MGP_LPJ_P0041585407 (aa)--
MGP_LPJ_T0041586-2780-MGP_LPJ_P0041586430 (aa)--
MGP_LPJ_T0041587-2246-MGP_LPJ_P0041587392 (aa)--
MGP_LPJ_T0041580-817-MGP_LPJ_P0041580151 (aa)--
MGP_LPJ_T0041581-607--- (aa)--
MGP_LPJ_T0041582-2460-MGP_LPJ_P0041582429 (aa)--
MGP_LPJ_T0041583-699-MGP_LPJ_P004158379 (aa)--
MGP_LPJ_T0041588-1323-MGP_LPJ_P0041588440 (aa)--
MGP_LPJ_T0041589-648-MGP_LPJ_P004158985 (aa)--
MGP_LPJ_T0041592-720--- (aa)--
Gene Model
Click here to download MGP_LPJ_G0021989's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0021989's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_LPJ_G0021989Apobec38438.028MGP_LPJ_G0031126Apobec17434.737
MGP_LPJ_G0021989Apobec39642.169MGP_LPJ_G0031125Aicda9138.251
MGP_LPJ_G0021989Apobec39833.721MGP_LPJ_G0023783Apobec27833.333

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