EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0022039 (Gene tree)
Gene ID: -
Gene Symbol: Sept3
Alias: 3110018K01Rik|AV154067|B530002E20Rik|Sep3
Full Name: septin 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 19502 bases
Position: chr15:82933918-82953419
Accession: 1345148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0041768	MMR_HSR1	PF01926.23	6e-08	1	1
MGP_LPJ_P0041769	MMR_HSR1	PF01926.23	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0041768	-	4728	XM_006520992	MGP_LPJ_P0041768	337 (aa)	XP_006521055	Q9Z1S5
MGP_LPJ_T0041769	-	2465	-	MGP_LPJ_P0041769	337 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0022039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0022039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0022039	Sept3	87	73.720	MGP_LPJ_G0019348	Sept9	82	75.377
MGP_LPJ_G0022039	Sept3	88	42.088	MGP_LPJ_G0035518	Sept6	70	42.088
MGP_LPJ_G0022039	Sept3	89	49.007	MGP_LPJ_G0016259	Sept2	100	50.000
MGP_LPJ_G0022039	Sept3	89	44.000	MGP_LPJ_G0029659	Sept11	69	44.000
MGP_LPJ_G0022039	Sept3	93	43.038	MGP_LPJ_G0018208	Sept8	69	43.038
MGP_LPJ_G0022039	Sept3	74	59.363	MGP_LPJ_G0022381	Sept12	84	56.877
MGP_LPJ_G0022039	Sept3	88	43.960	MGP_LPJ_G0017166	Sept10	68	43.960
MGP_LPJ_G0022039	Sept3	91	49.186	MGP_LPJ_G0022517	Sept5	78	51.042
MGP_LPJ_G0022039	Sept3	86	46.575	MGP_LPJ_G0032943	Sept1	100	50.685
MGP_LPJ_G0022039	Sept3	87	49.829	MGP_LPJ_G0034395	Sept7	66	49.829
MGP_LPJ_G0022039	Sept3	92	49.682	MGP_LPJ_G0018809	Sept4	93	49.537