EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0022205 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 17498 bases
Position: chr15:100544272-100561769
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0042294	DEAD	PF00270.29	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0042299	-	610	-	-	- (aa)	-	-
MGP_LPJ_T0042298	-	321	-	MGP_LPJ_P0042298	80 (aa)	-	-
MGP_LPJ_T0042295	-	3093	-	-	- (aa)	-	-
MGP_LPJ_T0042294	-	3179	XM_006521493	MGP_LPJ_P0042294	819 (aa)	XP_006521556	D3Z0M9
MGP_LPJ_T0042297	-	793	-	-	- (aa)	-	-
MGP_LPJ_T0042296	-	3411	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0022205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0022205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0022205	Ddx23	54	30.243	MGP_LPJ_G0018766	Ddx52	70	30.222
MGP_LPJ_G0022205	Ddx23	52	33.102	MGP_LPJ_G0016460	Ddx59	63	33.102
MGP_LPJ_G0022205	Ddx23	50	30.900	MGP_LPJ_G0022580	Eif4a2	92	30.900
MGP_LPJ_G0022205	Ddx23	54	40.757	MGP_LPJ_G0034961	Ddx43	63	40.757
MGP_LPJ_G0022205	Ddx23	52	40.139	MGP_LPJ_G0020510	Ddx41	75	37.400
MGP_LPJ_G0022205	Ddx23	51	39.110	MGP_LPJ_G0021977	Ddx17	60	39.110
MGP_LPJ_G0022205	Ddx23	52	37.868	MGP_LPJ_G0035462	Ddx3x	63	37.753
MGP_LPJ_G0022205	Ddx23	53	38.063	MGP_LPJ_G0016837	D1Pas1	63	38.063
MGP_LPJ_G0022205	Ddx23	50	37.915	MGP_LPJ_G0019215	Ddx5	81	36.389