EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0022836 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 28796 bases
Position: chr16:58705549-58734344
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0044651	MMR_HSR1	PF01926.23	2.9e-06	1	1
MGP_LPJ_P0044652	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_LPJ_P0044653	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_LPJ_P0044654	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0044653	-	874	-	MGP_LPJ_P0044653	193 (aa)	-	-
MGP_LPJ_T0044652	-	1553	-	MGP_LPJ_P0044652	193 (aa)	-	-
MGP_LPJ_T0044651	-	1695	XM_006522398	MGP_LPJ_P0044651	186 (aa)	XP_006522461	O88848
MGP_LPJ_T0044654	-	810	-	MGP_LPJ_P0044654	194 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0022836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0022836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0022836	Arl6	88	34.146	MGP_LPJ_G0021345	Arl11	91	34.146
MGP_LPJ_G0022836	Arl6	89	39.157	MGP_LPJ_G0025296	Arl5b	92	39.506
MGP_LPJ_G0022836	Arl6	99	30.851	MGP_LPJ_G0027230	Arl14	94	30.851
MGP_LPJ_G0022836	Arl6	54	37.143	MGP_LPJ_G0018185	Sar1b	52	37.143
MGP_LPJ_G0022836	Arl6	92	35.870	MGP_LPJ_G0016204	Arl4c	94	35.870
MGP_LPJ_G0022836	Arl6	90	35.714	MGP_LPJ_G0017545	Arl1	94	35.593
MGP_LPJ_G0022836	Arl6	97	37.433	MGP_LPJ_G0019602	Arl4a	92	37.433
MGP_LPJ_G0022836	Arl6	96	41.341	MGP_LPJ_G0018302	Arf1	96	41.341
MGP_LPJ_G0022836	Arl6	92	40.936	MGP_LPJ_G0019172	Arf2	92	40.936
MGP_LPJ_G0022836	Arl6	96	41.341	MGP_LPJ_G0022209	Arf3	96	41.341
MGP_LPJ_G0022836	Arl6	92	30.387	MGP_LPJ_G0026952	Arfrp1	93	33.929
MGP_LPJ_G0022836	Arl6	61	31.579	MGP_LPJ_G0020479	Arl10	53	31.579
MGP_LPJ_G0022836	Arl6	89	31.792	MGP_LPJ_G0019111	Arl4d	84	31.792
MGP_LPJ_G0022836	Arl6	85	32.704	MGP_LPJ_G0031001	Arl8b	82	32.704
MGP_LPJ_G0022836	Arl6	85	32.075	MGP_LPJ_G0016436	Arl8a	82	32.075
MGP_LPJ_G0022836	Arl6	99	36.216	MGP_LPJ_G0025140	Arl3	99	36.216
MGP_LPJ_G0022836	Arl6	90	36.527	MGP_LPJ_G0030413	Arf5	91	36.527
MGP_LPJ_G0022836	Arl6	91	37.647	MGP_LPJ_G0025665	Arl5a	93	37.647
MGP_LPJ_G0022836	Arl6	98	35.519	MGP_LPJ_G0024670	Arl2	97	35.519