EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0023165 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: BC068284|Zfp206|Zkscan10|Znf206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 10178 bases
Position: chr17:22762214-22772391
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	1	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	2	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	3	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	4	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	5	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	6	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	7	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	8	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	9	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	10	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	11	12
MGP_LPJ_P0045631	zf-C2H2	PF00096.26	4.4e-68	12	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	1	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	2	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	3	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	4	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	5	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	6	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	7	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	8	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	9	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	10	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	11	12
MGP_LPJ_P0045632	zf-C2H2	PF00096.26	5.1e-67	12	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	1	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	2	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	3	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	4	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	5	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	6	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	7	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	8	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	9	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	10	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	11	12
MGP_LPJ_P0045633	zf-C2H2	PF00096.26	4.8e-66	12	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	1	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	2	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	3	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	4	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	5	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	6	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	7	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	8	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	9	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	10	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	11	12
MGP_LPJ_P0045634	zf-C2H2	PF00096.26	2e-64	12	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	1	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	2	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	3	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	4	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	5	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	6	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	7	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	8	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	9	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	10	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	11	12
MGP_LPJ_P0045630	zf-C2H2	PF00096.26	5.3e-64	12	12
MGP_LPJ_P0045635	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_LPJ_P0045635	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_LPJ_P0045633	zf-met	PF12874.7	3.8e-07	1	1
MGP_LPJ_P0045634	zf-met	PF12874.7	1.1e-05	1	1
MGP_LPJ_P0045630	zf-met	PF12874.7	2.2e-05	1	1
MGP_LPJ_P0045631	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0045641	-	548	-	-	- (aa)	-	-
MGP_LPJ_T0045640	-	844	-	MGP_LPJ_P0045640	262 (aa)	-	-
MGP_LPJ_T0045638	-	909	-	MGP_LPJ_P0045638	190 (aa)	-	-
MGP_LPJ_T0045639	-	1006	-	MGP_LPJ_P0045639	190 (aa)	-	-
MGP_LPJ_T0045636	-	531	-	-	- (aa)	-	-
MGP_LPJ_T0045637	-	891	-	MGP_LPJ_P0045637	149 (aa)	-	-
MGP_LPJ_T0045634	-	2271	-	MGP_LPJ_P0045634	702 (aa)	-	-
MGP_LPJ_T0045635	-	1074	-	MGP_LPJ_P0045635	329 (aa)	-	-
MGP_LPJ_T0045632	-	2698	-	MGP_LPJ_P0045632	782 (aa)	-	-
MGP_LPJ_T0045633	-	1902	-	MGP_LPJ_P0045633	543 (aa)	-	-
MGP_LPJ_T0045630	-	2609	XM_011246504	MGP_LPJ_P0045630	750 (aa)	XP_011244806	Q3URR7
MGP_LPJ_T0045631	-	2368	-	MGP_LPJ_P0045631	672 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0023165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0023165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0023165	Zscan10	74	41.818	MGP_LPJ_G0031482	-	73	30.796
MGP_LPJ_G0023165	Zscan10	85	42.771	MGP_LPJ_G0029744	Gfi1	100	42.857
MGP_LPJ_G0023165	Zscan10	79	37.143	MGP_LPJ_G0024520	Zfp236	72	37.143
MGP_LPJ_G0023165	Zscan10	75	47.667	MGP_LPJ_G0021915	Zfp251	67	47.667
MGP_LPJ_G0023165	Zscan10	76	37.107	MGP_LPJ_G0026864	Zfp64	83	33.913
MGP_LPJ_G0023165	Zscan10	76	46.199	MGP_LPJ_G0031473	Zfp628	63	46.199
MGP_LPJ_G0023165	Zscan10	78	38.060	MGP_LPJ_G0023141	Zfp51	88	42.194
MGP_LPJ_G0023165	Zscan10	74	37.631	MGP_LPJ_G0018260	Zfp672	100	42.857
MGP_LPJ_G0023165	Zscan10	83	46.053	MGP_LPJ_G0034047	Zfp1	79	46.460
MGP_LPJ_G0023165	Zscan10	76	45.914	MGP_LPJ_G0032949	Zfp768	51	44.944
MGP_LPJ_G0023165	Zscan10	87	32.917	MGP_LPJ_G0020605	Zfp759	92	39.535
MGP_LPJ_G0023165	Zscan10	98	45.136	MGP_LPJ_G0020604	Rslcan18	84	45.136
MGP_LPJ_G0023165	Zscan10	79	34.332	MGP_LPJ_G0033673	Zfp882	85	35.160
MGP_LPJ_G0023165	Zscan10	81	41.509	MGP_LPJ_G0026401	Zfp661	93	44.628
MGP_LPJ_G0023165	Zscan10	78	43.254	MGP_LPJ_G0032952	E430018J23Rik	64	43.254
MGP_LPJ_G0023165	Zscan10	78	40.000	MGP_LPJ_G0031719	Zfp112	56	41.250
MGP_LPJ_G0023165	Zscan10	79	39.002	MGP_LPJ_G0034316	Zfp26	78	39.024
MGP_LPJ_G0023165	Zscan10	78	43.165	MGP_LPJ_G0028959	Zbtb17	72	34.627
MGP_LPJ_G0023165	Zscan10	76	35.191	MGP_LPJ_G0026827	Zfp334	69	39.394
MGP_LPJ_G0023165	Zscan10	88	44.915	MGP_LPJ_G0030735	Prdm5	90	35.235
MGP_LPJ_G0023165	Zscan10	86	31.579	MGP_LPJ_G0031481	Zfp865	82	31.579
MGP_LPJ_G0023165	Zscan10	78	40.179	MGP_LPJ_G0031892	Zfp420	97	41.080
MGP_LPJ_G0023165	Zscan10	80	45.495	MGP_LPJ_G0032019	Zfp141	59	45.495
MGP_LPJ_G0023165	Zscan10	80	42.342	MGP_LPJ_G0032013	2610021A01Rik	64	42.342
MGP_LPJ_G0023165	Zscan10	78	36.458	MGP_LPJ_G0030603	Repin1	92	36.705
MGP_LPJ_G0023165	Zscan10	78	35.342	MGP_LPJ_G0031827	-	87	35.342
MGP_LPJ_G0023165	Zscan10	86	32.915	MGP_LPJ_G0031756	Zfp574	93	33.902
MGP_LPJ_G0023165	Zscan10	78	47.953	MGP_LPJ_G0029407	Zbtb49	62	50.704
MGP_LPJ_G0023165	Zscan10	83	50.862	MGP_LPJ_G0031076	Zfp637	82	50.442
MGP_LPJ_G0023165	Zscan10	77	37.696	MGP_LPJ_G0018891	Zfp652	61	37.696
MGP_LPJ_G0023165	Zscan10	83	37.160	MGP_LPJ_G0018308	Zfp867	83	37.160
MGP_LPJ_G0023165	Zscan10	76	32.797	MGP_LPJ_G0016471	Zbtb41	54	32.797
MGP_LPJ_G0023165	Zscan10	75	35.128	MGP_LPJ_G0033890	Zfp319	93	34.081
MGP_LPJ_G0023165	Zscan10	78	36.820	MGP_LPJ_G0032020	Zfp715	64	36.820
MGP_LPJ_G0023165	Zscan10	78	39.617	MGP_LPJ_G0031724	Zfp108	59	42.194
MGP_LPJ_G0023165	Zscan10	78	47.393	MGP_LPJ_G0031725	Zfp61	51	47.393
MGP_LPJ_G0023165	Zscan10	77	40.456	MGP_LPJ_G0031726	Zfp94	70	44.402
MGP_LPJ_G0023165	Zscan10	77	37.065	MGP_LPJ_G0023161	Zfp945	84	37.065
MGP_LPJ_G0023165	Zscan10	75	44.554	MGP_LPJ_G0018163	Zfp454	70	41.854
MGP_LPJ_G0023165	Zscan10	75	37.965	MGP_LPJ_G0023139	Zfp677	90	37.965