EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0023566 (Gene tree)
Gene ID: -
Gene Symbol: Dhx16
Alias: 2410006N22Rik|DBP2|Ddx16|mKIAA0577
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 16
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 19865 bases
Position: chr17:36464494-36484358
Accession: 1916442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0047326	DEAD	PF00270.29	7.8e-07	1	1
MGP_LPJ_P0047326	HA2	PF04408.23	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0047331	-	462	-	-	- (aa)	-	-
MGP_LPJ_T0047327	-	3275	-	MGP_LPJ_P0047327	741 (aa)	-	-
MGP_LPJ_T0047333	-	491	-	-	- (aa)	-	-
MGP_LPJ_T0047332	-	490	-	MGP_LPJ_P0047332	122 (aa)	-	-
MGP_LPJ_T0047328	-	774	-	-	- (aa)	-	-
MGP_LPJ_T0047329	-	566	-	-	- (aa)	-	-
MGP_LPJ_T0047326	-	3351	XM_006524873	MGP_LPJ_P0047326	1044 (aa)	XP_006524936	G3UXT5
MGP_LPJ_T0047330	-	562	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0023566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0023566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0023566	Dhx16	62	47.813	MGP_LPJ_G0026736	Dhx35	94	47.813
MGP_LPJ_G0023566	Dhx16	67	49.714	MGP_LPJ_G0034010	Dhx38	57	48.957
MGP_LPJ_G0023566	Dhx16	59	33.486	MGP_LPJ_G0030811	Dqx1	89	33.486
MGP_LPJ_G0023566	Dhx16	61	46.319	MGP_LPJ_G0018526	Dhx33	93	46.319
MGP_LPJ_G0023566	Dhx16	60	42.510	MGP_LPJ_G0030014	Dhx37	60	42.510
MGP_LPJ_G0023566	Dhx16	61	52.396	MGP_LPJ_G0029443	Dhx15	81	53.684
MGP_LPJ_G0023566	Dhx16	59	32.457	MGP_LPJ_G0033041	Dhx32	86	32.457
MGP_LPJ_G0023566	Dhx16	56	42.564	MGP_LPJ_G0027196	Dhx36	62	42.564
MGP_LPJ_G0023566	Dhx16	61	41.864	MGP_LPJ_G0018798	Dhx40	99	36.726
MGP_LPJ_G0023566	Dhx16	60	58.954	MGP_LPJ_G0019112	Dhx8	53	58.954