EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0023797 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 28187 bases
Position: chr17:55738637-55766823
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0048020	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0048020	-	2084	-	MGP_LPJ_P0048020	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_LPJ_G0023797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0023797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0023797	Rab5a	81	37.989	MGP_LPJ_G0023897	Rab12	62	37.989
MGP_LPJ_G0023797	Rab5a	90	40.816	MGP_LPJ_G0024045	Rab18	93	40.816
MGP_LPJ_G0023797	Rab5a	78	31.737	MGP_LPJ_G0031491	Rasl2-9	76	31.737
MGP_LPJ_G0023797	Rab5a	95	41.546	MGP_LPJ_G0032482	Rab6a	98	41.546
MGP_LPJ_G0023797	Rab5a	78	41.916	MGP_LPJ_G0021198	Rab2b	79	44.079
MGP_LPJ_G0023797	Rab5a	91	41.951	MGP_LPJ_G0034839	Rab11a	88	48.148
MGP_LPJ_G0023797	Rab5a	90	46.429	MGP_LPJ_G0024612	Rab1b	96	46.429
MGP_LPJ_G0023797	Rab5a	91	47.449	MGP_LPJ_G0023888	Rab31	98	47.449
MGP_LPJ_G0023797	Rab5a	75	36.585	MGP_LPJ_G0035754	Rab39b	77	36.585
MGP_LPJ_G0023797	Rab5a	74	35.928	MGP_LPJ_G0022141	Rabl2	72	35.928
MGP_LPJ_G0023797	Rab5a	55	30.159	MGP_LPJ_G0019602	Arl4a	60	30.159
MGP_LPJ_G0023797	Rab5a	89	38.614	MGP_LPJ_G0025581	Rab14	94	38.614
MGP_LPJ_G0023797	Rab5a	74	40.881	MGP_LPJ_G0019767	Rab15	75	40.881
MGP_LPJ_G0023797	Rab5a	91	30.244	MGP_LPJ_G0017261	Rab36	77	30.244
MGP_LPJ_G0023797	Rab5a	90	40.704	MGP_LPJ_G0027336	Rab25	93	40.704
MGP_LPJ_G0023797	Rab5a	90	35.323	MGP_LPJ_G0036012	Rab9b	97	35.323
MGP_LPJ_G0023797	Rab5a	76	32.727	MGP_LPJ_G0027615	Nras	99	34.667
MGP_LPJ_G0023797	Rab5a	95	41.951	MGP_LPJ_G0019273	Rab37	93	41.951
MGP_LPJ_G0023797	Rab5a	81	40.782	MGP_LPJ_G0030901	Rab7	97	45.263
MGP_LPJ_G0023797	Rab5a	90	34.328	MGP_LPJ_G0036162	Rab9	97	34.328
MGP_LPJ_G0023797	Rab5a	82	31.667	MGP_LPJ_G0033130	Hras	94	31.667
MGP_LPJ_G0023797	Rab5a	56	33.065	MGP_LPJ_G0031001	Arl8b	63	33.065
MGP_LPJ_G0023797	Rab5a	60	32.576	MGP_LPJ_G0016436	Arl8a	66	32.576
MGP_LPJ_G0023797	Rab5a	73	32.500	MGP_LPJ_G0018671	Rab34	62	32.500
MGP_LPJ_G0023797	Rab5a	100	87.500	MGP_LPJ_G0019068	Rab5c	100	87.500
MGP_LPJ_G0023797	Rab5a	77	40.351	MGP_LPJ_G0027136	Rab33b	75	40.351
MGP_LPJ_G0023797	Rab5a	80	31.667	MGP_LPJ_G0031384	Kras	94	31.667
MGP_LPJ_G0023797	Rab5a	74	38.125	MGP_LPJ_G0015816	Rab23	67	38.125
MGP_LPJ_G0023797	Rab5a	90	37.436	MGP_LPJ_G0029876	Rab35	96	37.436
MGP_LPJ_G0023797	Rab5a	73	33.121	MGP_LPJ_G0029255	Rheb	85	33.121
MGP_LPJ_G0023797	Rab5a	90	43.814	MGP_LPJ_G0017974	Rab1a	95	43.814
MGP_LPJ_G0023797	Rab5a	90	49.231	MGP_LPJ_G0026893	Rab22a	98	49.231
MGP_LPJ_G0023797	Rab5a	90	41.667	MGP_LPJ_G0023444	Rab11b	94	41.667
MGP_LPJ_G0023797	Rab5a	81	43.678	MGP_LPJ_G0032422	Rab30	86	43.678
MGP_LPJ_G0023797	Rab5a	75	41.615	MGP_LPJ_G0027965	Rab2a	97	36.667
MGP_LPJ_G0023797	Rab5a	95	42.718	MGP_LPJ_G0035082	Rab6b	98	42.718
MGP_LPJ_G0023797	Rab5a	75	41.566	MGP_LPJ_G0035583	Rab33a	70	41.566