EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0023897 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik|AW555448|C77700
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 26213 bases
Position: chr17:69423678-69449890
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0048266	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0048266	-	2055	-	MGP_LPJ_P0048266	291 (aa)	-	P35283
MGP_LPJ_T0048267	-	629	-	-	- (aa)	-	-
MGP_LPJ_T0048268	-	381	-	-	- (aa)	-	-
MGP_LPJ_T0048269	-	669	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0023897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0023897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0023897	Rab12	72	43.396	MGP_LPJ_G0019767	Rab15	88	45.213
MGP_LPJ_G0023897	Rab12	53	31.210	MGP_LPJ_G0035059	Mras	80	31.548
MGP_LPJ_G0023897	Rab12	55	42.593	MGP_LPJ_G0019273	Rab37	75	43.210
MGP_LPJ_G0023897	Rab12	54	30.818	MGP_LPJ_G0029255	Rheb	85	30.818
MGP_LPJ_G0023897	Rab12	63	37.696	MGP_LPJ_G0035583	Rab33a	68	41.104
MGP_LPJ_G0023897	Rab12	59	45.614	MGP_LPJ_G0029876	Rab35	94	43.455
MGP_LPJ_G0023897	Rab12	58	50.296	MGP_LPJ_G0017974	Rab1a	82	50.296
MGP_LPJ_G0023897	Rab12	64	36.316	MGP_LPJ_G0030901	Rab7	90	48.864
MGP_LPJ_G0023897	Rab12	56	49.697	MGP_LPJ_G0024045	Rab18	79	49.697
MGP_LPJ_G0023897	Rab12	55	40.252	MGP_LPJ_G0032482	Rab6a	76	40.252
MGP_LPJ_G0023897	Rab12	55	37.107	MGP_LPJ_G0026893	Rab22a	81	37.107
MGP_LPJ_G0023897	Rab12	57	35.119	MGP_LPJ_G0015816	Rab23	69	35.119
MGP_LPJ_G0023897	Rab12	69	39.500	MGP_LPJ_G0021198	Rab2b	80	47.097
MGP_LPJ_G0023897	Rab12	62	47.778	MGP_LPJ_G0032422	Rab30	88	47.778
MGP_LPJ_G0023897	Rab12	73	33.023	MGP_LPJ_G0018671	Rab34	77	33.023
MGP_LPJ_G0023897	Rab12	67	37.755	MGP_LPJ_G0025581	Rab14	97	39.726
MGP_LPJ_G0023897	Rab12	70	37.736	MGP_LPJ_G0023444	Rab11b	76	41.916
MGP_LPJ_G0023897	Rab12	54	40.385	MGP_LPJ_G0035082	Rab6b	75	40.385
MGP_LPJ_G0023897	Rab12	52	30.464	MGP_LPJ_G0027615	Nras	97	30.405
MGP_LPJ_G0023897	Rab12	58	40.588	MGP_LPJ_G0027336	Rab25	79	40.588
MGP_LPJ_G0023897	Rab12	69	30.583	MGP_LPJ_G0036162	Rab9	83	34.132
MGP_LPJ_G0023897	Rab12	75	36.000	MGP_LPJ_G0019068	Rab5c	86	38.806
MGP_LPJ_G0023897	Rab12	62	42.308	MGP_LPJ_G0027965	Rab2a	85	42.308
MGP_LPJ_G0023897	Rab12	62	37.989	MGP_LPJ_G0023797	Rab5a	81	37.989
MGP_LPJ_G0023897	Rab12	54	38.462	MGP_LPJ_G0023888	Rab31	79	38.462
MGP_LPJ_G0023897	Rab12	57	42.262	MGP_LPJ_G0035754	Rab39b	78	42.262
MGP_LPJ_G0023897	Rab12	70	37.799	MGP_LPJ_G0034839	Rab11a	90	43.796
MGP_LPJ_G0023897	Rab12	58	49.704	MGP_LPJ_G0024612	Rab1b	84	49.704
MGP_LPJ_G0023897	Rab12	56	35.329	MGP_LPJ_G0036012	Rab9b	83	35.329
MGP_LPJ_G0023897	Rab12	53	34.194	MGP_LPJ_G0022141	Rabl2	67	34.194
MGP_LPJ_G0023897	Rab12	52	31.373	MGP_LPJ_G0031384	Kras	87	31.325
MGP_LPJ_G0023897	Rab12	66	36.869	MGP_LPJ_G0027136	Rab33b	83	36.224