EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0024195 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 116685 bases
Position: chr18:34986541-35103225
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0049179	KH_1	PF00013.29	1.8e-14	1	1
MGP_LPJ_P0049169	KH_1	PF00013.29	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0049175	-	610	-	-	- (aa)	-	-
MGP_LPJ_T0049174	-	658	-	MGP_LPJ_P0049174	218 (aa)	-	-
MGP_LPJ_T0049177	-	523	-	MGP_LPJ_P0049177	90 (aa)	-	-
MGP_LPJ_T0049176	-	603	-	MGP_LPJ_P0049176	110 (aa)	-	-
MGP_LPJ_T0049171	-	8235	-	MGP_LPJ_P0049171	2485 (aa)	-	-
MGP_LPJ_T0049170	-	8200	-	MGP_LPJ_P0049170	2485 (aa)	-	-
MGP_LPJ_T0049173	-	1033	-	-	- (aa)	-	-
MGP_LPJ_T0049172	-	1005	-	MGP_LPJ_P0049172	334 (aa)	-	-
MGP_LPJ_T0049180	-	2235	-	MGP_LPJ_P0049180	636 (aa)	-	-
MGP_LPJ_T0049181	-	860	-	MGP_LPJ_P0049181	168 (aa)	-	-
MGP_LPJ_T0049168	-	641	-	MGP_LPJ_P0049168	213 (aa)	-	E9PUR0
MGP_LPJ_T0049169	-	8223	-	MGP_LPJ_P0049169	2548 (aa)	-	-
MGP_LPJ_T0049179	-	3518	-	MGP_LPJ_P0049179	1020 (aa)	-	-
MGP_LPJ_T0049178	-	500	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0024195	Ankhd1	65	89.507	MGP_LPJ_G0029620	Ankrd17	69	89.358