EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0024377 (Gene tree)
Gene ID: -
Gene Symbol: F830016B08Rik
Alias: Ifgga4
Full Name: RIKEN cDNA F830016B08 gene
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 9053 bases
Position: chr18:59910856-59919908
Accession: 3588218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0049587	MMR_HSR1	PF01926.23	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0049587	-	2750	XM_006525926	MGP_LPJ_P0049587	417 (aa)	XP_006525989	G3UWE2

Gene Model

Click here to download MGP_LPJ_G0024377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0024377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0024377	F830016B08Rik	72	34.000	MGP_LPJ_G0018115	Irgm1	65	39.175
MGP_LPJ_G0024377	F830016B08Rik	97	49.136	MGP_LPJ_G0018116	Gm5431	83	49.136
MGP_LPJ_G0024377	F830016B08Rik	88	52.367	MGP_LPJ_G0018117	Gm12185	88	52.299
MGP_LPJ_G0024377	F830016B08Rik	88	30.769	MGP_LPJ_G0018256	Igtp	85	30.871
MGP_LPJ_G0024377	F830016B08Rik	88	33.947	MGP_LPJ_G0031731	Irgc1	82	33.947
MGP_LPJ_G0024377	F830016B08Rik	93	46.565	MGP_LPJ_G0018123	Tgtp2	94	46.565
MGP_LPJ_G0024377	F830016B08Rik	93	46.565	MGP_LPJ_G0018122	Tgtp1	94	46.565
MGP_LPJ_G0024377	F830016B08Rik	92	39.119	MGP_LPJ_G0018124	Ifi47	92	39.119
MGP_LPJ_G0024377	F830016B08Rik	97	47.561	MGP_LPJ_G0024376	Gm4951	99	47.561