EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0024520 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 105819 bases
Position: chr18:83446565-83552383
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	1	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	2	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	3	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	4	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	5	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	6	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	7	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	8	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	9	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	10	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	11	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	12	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	13	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	14	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	15	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	16	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	17	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	18	19
MGP_LPJ_P0050060	zf-C2H2	PF00096.26	2.6e-110	19	19
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	1	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	2	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	3	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	4	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	5	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	6	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	7	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	8	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	9	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	10	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	11	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	12	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	13	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	14	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	15	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	16	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	17	18
MGP_LPJ_P0050057	zf-C2H2	PF00096.26	1.3e-107	18	18
MGP_LPJ_P0050063	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_LPJ_P0050057	zf-met	PF12874.7	2.2e-06	1	4
MGP_LPJ_P0050057	zf-met	PF12874.7	2.2e-06	2	4
MGP_LPJ_P0050057	zf-met	PF12874.7	2.2e-06	3	4
MGP_LPJ_P0050057	zf-met	PF12874.7	2.2e-06	4	4
MGP_LPJ_P0050060	zf-met	PF12874.7	1.3e-05	1	4
MGP_LPJ_P0050060	zf-met	PF12874.7	1.3e-05	2	4
MGP_LPJ_P0050060	zf-met	PF12874.7	1.3e-05	3	4
MGP_LPJ_P0050060	zf-met	PF12874.7	1.3e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0050058	-	3228	-	MGP_LPJ_P0050058	42 (aa)	-	-
MGP_LPJ_T0050059	-	6171	-	MGP_LPJ_P0050059	485 (aa)	-	-
MGP_LPJ_T0050057	-	9532	XM_006526490	MGP_LPJ_P0050057	1799 (aa)	XP_006526553	B2RR24
MGP_LPJ_T0050061	-	5629	-	MGP_LPJ_P0050061	1840 (aa)	-	-
MGP_LPJ_T0050060	-	6060	-	MGP_LPJ_P0050060	1847 (aa)	-	-
MGP_LPJ_T0050063	-	404	-	MGP_LPJ_P0050063	65 (aa)	-	-
MGP_LPJ_T0050062	-	665	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0024520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0024520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0024520	Zfp236	63	42.697	MGP_LPJ_G0018163	Zfp454	75	42.982
MGP_LPJ_G0024520	Zfp236	86	31.818	MGP_LPJ_G0017088	Zbtb24	54	45.794
MGP_LPJ_G0024520	Zfp236	72	37.143	MGP_LPJ_G0023165	Zscan10	79	37.143
MGP_LPJ_G0024520	Zfp236	81	41.758	MGP_LPJ_G0030603	Repin1	99	41.667
MGP_LPJ_G0024520	Zfp236	78	37.273	MGP_LPJ_G0031827	-	88	37.273
MGP_LPJ_G0024520	Zfp236	81	53.333	MGP_LPJ_G0026863	Sall4	73	53.333
MGP_LPJ_G0024520	Zfp236	78	41.667	MGP_LPJ_G0026864	Zfp64	70	42.500
MGP_LPJ_G0024520	Zfp236	59	42.308	MGP_LPJ_G0031473	Zfp628	61	42.500
MGP_LPJ_G0024520	Zfp236	75	45.283	MGP_LPJ_G0023141	Zfp51	74	45.283
MGP_LPJ_G0024520	Zfp236	66	45.455	MGP_LPJ_G0031076	Zfp637	85	51.807
MGP_LPJ_G0024520	Zfp236	60	45.652	MGP_LPJ_G0034047	Zfp1	67	45.714
MGP_LPJ_G0024520	Zfp236	70	48.864	MGP_LPJ_G0027059	Mynn	62	48.864
MGP_LPJ_G0024520	Zfp236	58	42.177	MGP_LPJ_G0032952	E430018J23Rik	59	42.177
MGP_LPJ_G0024520	Zfp236	71	35.669	MGP_LPJ_G0031179	Zfp384	68	38.655
MGP_LPJ_G0024520	Zfp236	69	40.559	MGP_LPJ_G0021915	Zfp251	79	40.559
MGP_LPJ_G0024520	Zfp236	77	35.714	MGP_LPJ_G0030735	Prdm5	86	46.739
MGP_LPJ_G0024520	Zfp236	57	36.242	MGP_LPJ_G0034129	Snai3	57	47.297
MGP_LPJ_G0024520	Zfp236	54	46.739	MGP_LPJ_G0029744	Gfi1	100	46.739
MGP_LPJ_G0024520	Zfp236	58	48.780	MGP_LPJ_G0032949	Zfp768	53	45.536
MGP_LPJ_G0024520	Zfp236	69	42.727	MGP_LPJ_G0028959	Zbtb17	61	42.727
MGP_LPJ_G0024520	Zfp236	76	53.704	MGP_LPJ_G0033831	Sall1	67	53.704
MGP_LPJ_G0024520	Zfp236	66	38.824	MGP_LPJ_G0016471	Zbtb41	61	38.824
MGP_LPJ_G0024520	Zfp236	63	42.500	MGP_LPJ_G0031756	Zfp574	77	41.304
MGP_LPJ_G0024520	Zfp236	78	36.471	MGP_LPJ_G0018260	Zfp672	96	41.096
MGP_LPJ_G0024520	Zfp236	69	44.643	MGP_LPJ_G0031481	Zfp865	78	44.643
MGP_LPJ_G0024520	Zfp236	68	44.643	MGP_LPJ_G0031482	-	66	44.643
MGP_LPJ_G0024520	Zfp236	77	40.157	MGP_LPJ_G0018308	Zfp867	94	44.262
MGP_LPJ_G0024520	Zfp236	62	43.023	MGP_LPJ_G0029407	Zbtb49	62	47.887
MGP_LPJ_G0024520	Zfp236	78	40.690	MGP_LPJ_G0033890	Zfp319	87	41.250
MGP_LPJ_G0024520	Zfp236	53	30.734	MGP_LPJ_G0031484	Zfp784	79	40.244
MGP_LPJ_G0024520	Zfp236	79	38.732	MGP_LPJ_G0023161	Zfp945	77	45.349
MGP_LPJ_G0024520	Zfp236	64	40.777	MGP_LPJ_G0031719	Zfp112	52	42.742
MGP_LPJ_G0024520	Zfp236	59	41.748	MGP_LPJ_G0018891	Zfp652	60	41.748
MGP_LPJ_G0024520	Zfp236	67	46.341	MGP_LPJ_G0032019	Zfp141	63	46.341
MGP_LPJ_G0024520	Zfp236	66	46.429	MGP_LPJ_G0032013	2610021A01Rik	56	46.429
MGP_LPJ_G0024520	Zfp236	80	43.902	MGP_LPJ_G0020605	Zfp759	97	41.525
MGP_LPJ_G0024520	Zfp236	60	47.727	MGP_LPJ_G0020604	Rslcan18	70	47.727
MGP_LPJ_G0024520	Zfp236	62	42.857	MGP_LPJ_G0031725	Zfp61	57	47.727
MGP_LPJ_G0024520	Zfp236	67	42.647	MGP_LPJ_G0031726	Zfp94	76	42.647
MGP_LPJ_G0024520	Zfp236	80	46.512	MGP_LPJ_G0031892	Zfp420	99	47.059
MGP_LPJ_G0024520	Zfp236	74	42.857	MGP_LPJ_G0032020	Zfp715	69	41.935
MGP_LPJ_G0024520	Zfp236	76	34.940	MGP_LPJ_G0032976	Zfp646	90	34.940
MGP_LPJ_G0024520	Zfp236	70	46.296	MGP_LPJ_G0034316	Zfp26	70	47.273
MGP_LPJ_G0024520	Zfp236	79	44.545	MGP_LPJ_G0026827	Zfp334	68	45.556
MGP_LPJ_G0024520	Zfp236	70	40.187	MGP_LPJ_G0033673	Zfp882	87	44.565
MGP_LPJ_G0024520	Zfp236	69	42.222	MGP_LPJ_G0023139	Zfp677	78	45.455
MGP_LPJ_G0024520	Zfp236	61	41.228	MGP_LPJ_G0026401	Zfp661	69	42.857
MGP_LPJ_G0024520	Zfp236	65	44.643	MGP_LPJ_G0031724	Zfp108	58	45.000