EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0024590 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 75583 bases
Position: chr19:1640540-1716122
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0050323	zf-CCHC	PF00098.23	2.8e-07	1	1
MGP_LPJ_P0050325	RRM_1	PF00076.22	2.3e-26	1	3
MGP_LPJ_P0050325	RRM_1	PF00076.22	2.3e-26	2	3
MGP_LPJ_P0050325	RRM_1	PF00076.22	2.3e-26	3	3
MGP_LPJ_P0050323	RRM_1	PF00076.22	9.7e-18	1	2
MGP_LPJ_P0050323	RRM_1	PF00076.22	9.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0050323	-	1435	-	MGP_LPJ_P0050323	336 (aa)	-	-
MGP_LPJ_T0050327	-	2265	-	-	- (aa)	-	-
MGP_LPJ_T0050324	-	456	-	MGP_LPJ_P0050324	19 (aa)	-	-
MGP_LPJ_T0050325	-	1267	-	MGP_LPJ_P0050325	421 (aa)	-	-
MGP_LPJ_T0050328	-	490	-	-	- (aa)	-	-
MGP_LPJ_T0050315	-	2590	-	MGP_LPJ_P0050315	118 (aa)	-	B0LM42

Gene Model

Click here to download MGP_LPJ_G0024590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0024590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0024590	Gm21992	72	100.000	MGP_LPJ_G0024592	-	100	100.000
MGP_LPJ_G0024590	Gm21992	100	96.610	MGP_LPJ_G0024593	Rbm14	97	99.130
MGP_LPJ_G0024590	Gm21992	100	61.739	MGP_LPJ_G0024591	Rbm4b	99	62.319
MGP_LPJ_G0024590	Gm21992	90	31.061	MGP_LPJ_G0017404	Dazap1	76	32.824