EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_LPJ_G0024729 (Gene tree)
Gene ID
-
Gene Symbol
Nxf1
Alias
0610006I08Rik|Mex67|Mvb1|TAP|Tap|Tip associated protein
Full Name
nuclear RNA export factor 1
Gene Type
protein_coding
Species
Mus_musculus_lpj
Status
putative
Strand
Plus strand
Length
17468 bases
Position
chr19:5919959-5937426
Accession
1858330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_LPJ_P0050814Tap-RNA_bindPF09162.101.6e-3811
MGP_LPJ_P0050815Tap-RNA_bindPF09162.101.8e-3811
MGP_LPJ_P0050817Tap-RNA_bindPF09162.101.1e-2211
MGP_LPJ_P0050823TAP_CPF03943.137.1e-2611
MGP_LPJ_P0050814TAP_CPF03943.131.8e-2411
MGP_LPJ_P0050814NTF2PF02136.209e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_LPJ_T0050818-567-MGP_LPJ_P005081875 (aa)--
MGP_LPJ_T0050819-236-MGP_LPJ_P005081978 (aa)--
MGP_LPJ_T0050814-2326-MGP_LPJ_P0050814618 (aa)-Q99JX7
MGP_LPJ_T0050815-5399-MGP_LPJ_P0050815418 (aa)--
MGP_LPJ_T0050816-590--- (aa)--
MGP_LPJ_T0050817-1017-MGP_LPJ_P0050817282 (aa)--
MGP_LPJ_T0050825-474--- (aa)--
MGP_LPJ_T0050824-431--- (aa)--
MGP_LPJ_T0050821-927--- (aa)--
MGP_LPJ_T0050820-3116-MGP_LPJ_P0050820251 (aa)--
MGP_LPJ_T0050823-505-MGP_LPJ_P005082388 (aa)--
MGP_LPJ_T0050822-519--- (aa)--
Gene Model
Click here to download MGP_LPJ_G0024729's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0024729's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_LPJ_G0024729Nxf19948.000MGP_LPJ_G0035997Nxf39138.475
MGP_LPJ_G0024729Nxf19950.602MGP_LPJ_G0035986Nxf79947.727
MGP_LPJ_G0024729Nxf19856.504MGP_LPJ_G0035980Nxf28254.887

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