EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0024932 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 195981 bases
Position: chr19:24905468-25101448
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0051253	ResIII	PF04851.15	3.9e-08	1	1
MGP_LPJ_P0051254	ResIII	PF04851.15	4e-08	1	1
MGP_LPJ_P0051257	ResIII	PF04851.15	2.1e-06	1	1
MGP_LPJ_P0051257	BRK	PF07533.16	3.6e-17	1	1
MGP_LPJ_P0051253	BRK	PF07533.16	3.7e-17	1	1
MGP_LPJ_P0051254	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0051271	-	956	-	MGP_LPJ_P0051271	119 (aa)	-	-
MGP_LPJ_T0051260	-	1584	-	-	- (aa)	-	-
MGP_LPJ_T0051270	-	1448	-	MGP_LPJ_P0051270	113 (aa)	-	-
MGP_LPJ_T0051272	-	736	-	MGP_LPJ_P0051272	119 (aa)	-	-
MGP_LPJ_T0051264	-	942	-	MGP_LPJ_P0051264	254 (aa)	-	-
MGP_LPJ_T0051265	-	788	-	MGP_LPJ_P0051265	224 (aa)	-	-
MGP_LPJ_T0051266	-	879	-	MGP_LPJ_P0051266	276 (aa)	-	-
MGP_LPJ_T0051267	-	1846	-	MGP_LPJ_P0051267	236 (aa)	-	-
MGP_LPJ_T0051259	-	661	-	-	- (aa)	-	-
MGP_LPJ_T0051258	-	651	-	MGP_LPJ_P0051258	175 (aa)	-	-
MGP_LPJ_T0051262	-	426	-	-	- (aa)	-	-
MGP_LPJ_T0051263	-	929	-	MGP_LPJ_P0051263	254 (aa)	-	-
MGP_LPJ_T0051255	-	5907	-	MGP_LPJ_P0051255	1512 (aa)	-	-
MGP_LPJ_T0051254	-	5856	-	MGP_LPJ_P0051254	1603 (aa)	-	-
MGP_LPJ_T0051257	-	4584	-	MGP_LPJ_P0051257	1527 (aa)	-	-
MGP_LPJ_T0051256	-	5932	-	MGP_LPJ_P0051256	1576 (aa)	-	-
MGP_LPJ_T0051268	-	835	-	MGP_LPJ_P0051268	235 (aa)	-	-
MGP_LPJ_T0051269	-	490	-	MGP_LPJ_P0051269	83 (aa)	-	-
MGP_LPJ_T0051253	-	5852	XM_006527281	MGP_LPJ_P0051253	1585 (aa)	XP_006527344	A0A140LHE2
MGP_LPJ_T0051261	-	867	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0024932	Smarca2	98	73.829	MGP_LPJ_G0034357	Smarca4	93	80.949