EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0025262 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 978108 bases
Position: chr2:3652199-4630306
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0052313	RRM_1	PF00076.22	2.5e-51	1	3
MGP_LPJ_P0052313	RRM_1	PF00076.22	2.5e-51	2	3
MGP_LPJ_P0052313	RRM_1	PF00076.22	2.5e-51	3	3
MGP_LPJ_P0052314	RRM_1	PF00076.22	2.5e-51	1	3
MGP_LPJ_P0052314	RRM_1	PF00076.22	2.5e-51	2	3
MGP_LPJ_P0052314	RRM_1	PF00076.22	2.5e-51	3	3
MGP_LPJ_P0052322	RRM_1	PF00076.22	2.6e-51	1	3
MGP_LPJ_P0052322	RRM_1	PF00076.22	2.6e-51	2	3
MGP_LPJ_P0052322	RRM_1	PF00076.22	2.6e-51	3	3
MGP_LPJ_P0052324	RRM_1	PF00076.22	2.6e-51	1	3
MGP_LPJ_P0052324	RRM_1	PF00076.22	2.6e-51	2	3
MGP_LPJ_P0052324	RRM_1	PF00076.22	2.6e-51	3	3
MGP_LPJ_P0052323	RRM_1	PF00076.22	2.7e-51	1	3
MGP_LPJ_P0052323	RRM_1	PF00076.22	2.7e-51	2	3
MGP_LPJ_P0052323	RRM_1	PF00076.22	2.7e-51	3	3
MGP_LPJ_P0052319	RRM_1	PF00076.22	3.1e-51	1	3
MGP_LPJ_P0052319	RRM_1	PF00076.22	3.1e-51	2	3
MGP_LPJ_P0052319	RRM_1	PF00076.22	3.1e-51	3	3
MGP_LPJ_P0052315	RRM_1	PF00076.22	3.2e-51	1	3
MGP_LPJ_P0052315	RRM_1	PF00076.22	3.2e-51	2	3
MGP_LPJ_P0052315	RRM_1	PF00076.22	3.2e-51	3	3
MGP_LPJ_P0052317	RRM_1	PF00076.22	3.2e-51	1	3
MGP_LPJ_P0052317	RRM_1	PF00076.22	3.2e-51	2	3
MGP_LPJ_P0052317	RRM_1	PF00076.22	3.2e-51	3	3
MGP_LPJ_P0052320	RRM_1	PF00076.22	3.4e-51	1	3
MGP_LPJ_P0052320	RRM_1	PF00076.22	3.4e-51	2	3
MGP_LPJ_P0052320	RRM_1	PF00076.22	3.4e-51	3	3
MGP_LPJ_P0052321	RRM_1	PF00076.22	4.9e-39	1	3
MGP_LPJ_P0052321	RRM_1	PF00076.22	4.9e-39	2	3
MGP_LPJ_P0052321	RRM_1	PF00076.22	4.9e-39	3	3
MGP_LPJ_P0052325	RRM_1	PF00076.22	5.8e-39	1	3
MGP_LPJ_P0052325	RRM_1	PF00076.22	5.8e-39	2	3
MGP_LPJ_P0052325	RRM_1	PF00076.22	5.8e-39	3	3
MGP_LPJ_P0052316	RRM_1	PF00076.22	6.2e-39	1	3
MGP_LPJ_P0052316	RRM_1	PF00076.22	6.2e-39	2	3
MGP_LPJ_P0052316	RRM_1	PF00076.22	6.2e-39	3	3
MGP_LPJ_P0052318	RRM_1	PF00076.22	6.5e-39	1	3
MGP_LPJ_P0052318	RRM_1	PF00076.22	6.5e-39	2	3
MGP_LPJ_P0052318	RRM_1	PF00076.22	6.5e-39	3	3
MGP_LPJ_P0052332	RRM_1	PF00076.22	7.5e-19	1	1
MGP_LPJ_P0052328	RRM_1	PF00076.22	2.4e-15	1	1
MGP_LPJ_P0052335	RRM_1	PF00076.22	2.2e-14	1	1
MGP_LPJ_P0052337	RRM_1	PF00076.22	1.1e-13	1	1
MGP_LPJ_P0052338	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0052340	-	769	-	-	- (aa)	-	-
MGP_LPJ_T0052319	-	3587	-	MGP_LPJ_P0052319	508 (aa)	-	-
MGP_LPJ_T0052332	-	630	-	MGP_LPJ_P0052332	134 (aa)	-	-
MGP_LPJ_T0052320	-	2525	-	MGP_LPJ_P0052320	520 (aa)	-	-
MGP_LPJ_T0052321	-	2223	-	MGP_LPJ_P0052321	440 (aa)	-	-
MGP_LPJ_T0052322	-	1721	-	MGP_LPJ_P0052322	488 (aa)	-	-
MGP_LPJ_T0052323	-	2338	-	MGP_LPJ_P0052323	490 (aa)	-	-
MGP_LPJ_T0052324	-	2332	-	MGP_LPJ_P0052324	488 (aa)	-	-
MGP_LPJ_T0052325	-	2177	-	MGP_LPJ_P0052325	460 (aa)	-	-
MGP_LPJ_T0052326	-	1996	-	MGP_LPJ_P0052326	443 (aa)	-	-
MGP_LPJ_T0052327	-	1240	-	-	- (aa)	-	-
MGP_LPJ_T0052328	-	1024	-	MGP_LPJ_P0052328	276 (aa)	-	-
MGP_LPJ_T0052329	-	4798	-	-	- (aa)	-	-
MGP_LPJ_T0052339	-	1972	-	-	- (aa)	-	-
MGP_LPJ_T0052333	-	4802	-	-	- (aa)	-	-
MGP_LPJ_T0052318	-	3853	-	MGP_LPJ_P0052318	472 (aa)	-	-
MGP_LPJ_T0052331	-	923	-	-	- (aa)	-	-
MGP_LPJ_T0052330	-	405	-	-	- (aa)	-	-
MGP_LPJ_T0052337	-	529	-	MGP_LPJ_P0052337	159 (aa)	-	-
MGP_LPJ_T0052336	-	4143	-	-	- (aa)	-	-
MGP_LPJ_T0052335	-	402	-	MGP_LPJ_P0052335	92 (aa)	-	-
MGP_LPJ_T0052334	-	2075	-	-	- (aa)	-	-
MGP_LPJ_T0052313	-	7706	XM_006497333	MGP_LPJ_P0052313	484 (aa)	XP_006497396	Q9Z0H4
MGP_LPJ_T0052338	-	331	-	MGP_LPJ_P0052338	46 (aa)	-	-
MGP_LPJ_T0052315	-	8726	-	MGP_LPJ_P0052315	526 (aa)	-	-
MGP_LPJ_T0052314	-	7479	-	MGP_LPJ_P0052314	484 (aa)	-	-
MGP_LPJ_T0052317	-	5462	-	MGP_LPJ_P0052317	526 (aa)	-	-
MGP_LPJ_T0052316	-	8844	-	MGP_LPJ_P0052316	478 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0025262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0025262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0025262	Celf2	57	34.884	MGP_LPJ_G0026769	Pabpc1l	53	34.884
MGP_LPJ_G0025262	Celf2	88	32.099	MGP_LPJ_G0035637	Rbmx	78	30.000
MGP_LPJ_G0025262	Celf2	90	55.556	MGP_LPJ_G0024123	Celf4	95	46.304
MGP_LPJ_G0025262	Celf2	82	33.333	MGP_LPJ_G0017398	Cirbp	80	32.558
MGP_LPJ_G0025262	Celf2	64	43.210	MGP_LPJ_G0033249	Elavl1	81	43.210
MGP_LPJ_G0025262	Celf2	87	33.333	MGP_LPJ_G0028358	Elavl2	83	39.506
MGP_LPJ_G0025262	Celf2	100	88.060	MGP_LPJ_G0026076	Celf1	100	80.082
MGP_LPJ_G0025262	Celf2	61	34.177	MGP_LPJ_G0032999	Tial1	65	31.481
MGP_LPJ_G0025262	Celf2	51	35.443	MGP_LPJ_G0030871	Tia1	83	35.443
MGP_LPJ_G0025262	Celf2	61	35.714	MGP_LPJ_G0015950	Boll	57	32.000
MGP_LPJ_G0025262	Celf2	82	34.667	MGP_LPJ_G0034372	Elavl3	73	40.741
MGP_LPJ_G0025262	Celf2	92	53.659	MGP_LPJ_G0017472	Celf5	93	59.770
MGP_LPJ_G0025262	Celf2	57	35.714	MGP_LPJ_G0021700	Pabpc1	51	34.884
MGP_LPJ_G0025262	Celf2	77	39.474	MGP_LPJ_G0035290	Rbms3	75	37.079
MGP_LPJ_G0025262	Celf2	57	34.211	MGP_LPJ_G0023047	Pabpc6	51	34.211
MGP_LPJ_G0025262	Celf2	94	83.333	MGP_LPJ_G0027482	Celf3	99	45.783
MGP_LPJ_G0025262	Celf2	61	38.272	MGP_LPJ_G0028490	Elavl4	81	38.272
MGP_LPJ_G0025262	Celf2	77	39.474	MGP_LPJ_G0017761	Rbms2	51	39.474
MGP_LPJ_G0025262	Celf2	79	80.952	MGP_LPJ_G0034798	Celf6	91	45.567