EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0025296 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 34379 bases
Position: chr2:12500794-12535172
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0052545	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_LPJ_P0052547	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0052548	-	1035	-	MGP_LPJ_P0052548	40 (aa)	-	-
MGP_LPJ_T0052549	-	481	-	MGP_LPJ_P0052549	35 (aa)	-	-
MGP_LPJ_T0052545	-	6917	XM_017319316	MGP_LPJ_P0052545	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_LPJ_T0052547	-	6965	-	MGP_LPJ_P0052547	180 (aa)	-	-
MGP_LPJ_T0052552	-	706	-	MGP_LPJ_P0052552	56 (aa)	-	-
MGP_LPJ_T0052551	-	3210	-	-	- (aa)	-	-
MGP_LPJ_T0052550	-	778	-	MGP_LPJ_P0052550	30 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0025296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0025296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0025296	Arl5b	98	81.437	MGP_LPJ_G0025665	Arl5a	100	79.888
MGP_LPJ_G0025296	Arl5b	99	44.444	MGP_LPJ_G0030413	Arf5	100	44.444
MGP_LPJ_G0025296	Arl5b	98	50.282	MGP_LPJ_G0018302	Arf1	98	50.282
MGP_LPJ_G0025296	Arl5b	94	39.759	MGP_LPJ_G0019111	Arl4d	83	39.759
MGP_LPJ_G0025296	Arl5b	92	37.126	MGP_LPJ_G0026952	Arfrp1	84	40.196
MGP_LPJ_G0025296	Arl5b	83	30.667	MGP_LPJ_G0031001	Arl8b	78	30.667
MGP_LPJ_G0025296	Arl5b	93	40.000	MGP_LPJ_G0021345	Arl11	91	40.000
MGP_LPJ_G0025296	Arl5b	96	37.500	MGP_LPJ_G0027230	Arl14	90	37.500
MGP_LPJ_G0025296	Arl5b	96	44.512	MGP_LPJ_G0024670	Arl2	90	44.242
MGP_LPJ_G0025296	Arl5b	98	49.718	MGP_LPJ_G0019172	Arf2	98	49.718
MGP_LPJ_G0025296	Arl5b	98	49.718	MGP_LPJ_G0022209	Arf3	98	49.718
MGP_LPJ_G0025296	Arl5b	84	33.562	MGP_LPJ_G0016436	Arl8a	78	33.553
MGP_LPJ_G0025296	Arl5b	92	39.506	MGP_LPJ_G0022836	Arl6	89	39.157
MGP_LPJ_G0025296	Arl5b	90	42.593	MGP_LPJ_G0016204	Arl4c	85	42.169
MGP_LPJ_G0025296	Arl5b	99	43.094	MGP_LPJ_G0025140	Arl3	99	43.094
MGP_LPJ_G0025296	Arl5b	96	50.000	MGP_LPJ_G0017545	Arl1	99	48.889
MGP_LPJ_G0025296	Arl5b	65	34.211	MGP_LPJ_G0020479	Arl10	55	34.211
MGP_LPJ_G0025296	Arl5b	94	43.373	MGP_LPJ_G0019602	Arl4a	85	43.787
MGP_LPJ_G0025296	Arl5b	67	30.952	MGP_LPJ_G0026893	Rab22a	61	30.952