EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0025517 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 45911 bases
Position: chr2:29820331-29866241
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0053823	KH_1	PF00013.29	1e-68	1	4
MGP_LPJ_P0053823	KH_1	PF00013.29	1e-68	2	4
MGP_LPJ_P0053823	KH_1	PF00013.29	1e-68	3	4
MGP_LPJ_P0053823	KH_1	PF00013.29	1e-68	4	4
MGP_LPJ_P0053827	KH_1	PF00013.29	1.1e-68	1	4
MGP_LPJ_P0053827	KH_1	PF00013.29	1.1e-68	2	4
MGP_LPJ_P0053827	KH_1	PF00013.29	1.1e-68	3	4
MGP_LPJ_P0053827	KH_1	PF00013.29	1.1e-68	4	4
MGP_LPJ_P0053830	KH_1	PF00013.29	7.6e-19	1	1
MGP_LPJ_P0053826	KH_1	PF00013.29	8.1e-11	1	1
MGP_LPJ_P0053823	KH_2	PF07650.17	7.7e-21	1	1
MGP_LPJ_P0053827	KH_2	PF07650.17	8e-21	1	1
MGP_LPJ_P0053830	KH_2	PF07650.17	1.4e-05	1	1
MGP_LPJ_P0053831	DUF1897	PF09005.10	4.2e-09	1	2
MGP_LPJ_P0053831	DUF1897	PF09005.10	4.2e-09	2	2
MGP_LPJ_P0053832	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0053830	-	1073	-	MGP_LPJ_P0053830	263 (aa)	-	-
MGP_LPJ_T0053824	-	372	-	MGP_LPJ_P0053824	97 (aa)	-	-
MGP_LPJ_T0053825	-	1909	-	-	- (aa)	-	-
MGP_LPJ_T0053826	-	425	-	MGP_LPJ_P0053826	123 (aa)	-	-
MGP_LPJ_T0053827	-	3648	-	MGP_LPJ_P0053827	575 (aa)	-	-
MGP_LPJ_T0053833	-	2342	-	-	- (aa)	-	-
MGP_LPJ_T0053832	-	437	-	MGP_LPJ_P0053832	52 (aa)	-	-
MGP_LPJ_T0053831	-	843	-	MGP_LPJ_P0053831	103 (aa)	-	-
MGP_LPJ_T0053823	-	3268	XM_006498126	MGP_LPJ_P0053823	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_LPJ_T0053828	-	453	-	MGP_LPJ_P0053828	83 (aa)	-	-
MGP_LPJ_T0053829	-	908	-	MGP_LPJ_P0053829	191 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0025517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0025517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0025517	Fubp3	70	36.000	MGP_LPJ_G0035120	-	83	36.000
MGP_LPJ_G0025517	Fubp3	71	35.897	MGP_LPJ_G0020541	Hnrnpk	57	35.897
MGP_LPJ_G0025517	Fubp3	95	58.824	MGP_LPJ_G0023858	Khsrp	66	48.682
MGP_LPJ_G0025517	Fubp3	79	31.707	MGP_LPJ_G0027478	Tdrkh	74	31.707
MGP_LPJ_G0025517	Fubp3	96	64.324	MGP_LPJ_G0027915	Fubp1	94	59.208
MGP_LPJ_G0025517	Fubp3	58	30.000	MGP_LPJ_G0022568	Igf2bp2	66	30.000
MGP_LPJ_G0025517	Fubp3	88	32.370	MGP_LPJ_G0030874	Pcbp1	60	31.169
MGP_LPJ_G0025517	Fubp3	77	31.973	MGP_LPJ_G0017301	Pcbp3	85	31.973