EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0025649 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 138324 bases
Position: chr2:43850075-43988398
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0054512	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_LPJ_P0054512	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_LPJ_P0054512	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_LPJ_P0054512	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_LPJ_P0054512	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_LPJ_P0054514	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_LPJ_P0054514	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_LPJ_P0054514	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_LPJ_P0054514	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_LPJ_P0054514	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_LPJ_P0054508	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_LPJ_P0054508	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_LPJ_P0054508	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_LPJ_P0054508	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_LPJ_P0054508	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_LPJ_P0054511	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_LPJ_P0054511	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_LPJ_P0054511	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_LPJ_P0054511	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_LPJ_P0054511	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_LPJ_P0054513	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_LPJ_P0054513	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_LPJ_P0054513	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_LPJ_P0054513	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_LPJ_P0054513	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_LPJ_P0054510	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_LPJ_P0054510	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_LPJ_P0054510	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_LPJ_P0054510	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_LPJ_P0054510	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_LPJ_P0054515	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_LPJ_P0054515	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_LPJ_P0054515	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_LPJ_P0054515	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_LPJ_P0054509	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_LPJ_P0054509	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_LPJ_P0054509	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_LPJ_P0054512	zf-met	PF12874.7	1.4e-06	1	1
MGP_LPJ_P0054514	zf-met	PF12874.7	1.7e-06	1	1
MGP_LPJ_P0054508	zf-met	PF12874.7	1.7e-06	1	1
MGP_LPJ_P0054511	zf-met	PF12874.7	1.7e-06	1	1
MGP_LPJ_P0054513	zf-met	PF12874.7	1.7e-06	1	1
MGP_LPJ_P0054510	zf-met	PF12874.7	2.3e-06	1	1
MGP_LPJ_P0054515	zf-met	PF12874.7	5.8e-05	1	2
MGP_LPJ_P0054515	zf-met	PF12874.7	5.8e-05	2	2
MGP_LPJ_P0054509	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0054520	-	631	-	MGP_LPJ_P0054520	141 (aa)	-	-
MGP_LPJ_T0054521	-	618	-	-	- (aa)	-	-
MGP_LPJ_T0054522	-	443	-	MGP_LPJ_P0054522	113 (aa)	-	-
MGP_LPJ_T0054523	-	2682	-	-	- (aa)	-	-
MGP_LPJ_T0054524	-	2914	-	-	- (aa)	-	-
MGP_LPJ_T0054525	-	550	-	MGP_LPJ_P0054525	91 (aa)	-	-
MGP_LPJ_T0054526	-	577	-	MGP_LPJ_P0054526	63 (aa)	-	-
MGP_LPJ_T0054527	-	462	-	MGP_LPJ_P0054527	83 (aa)	-	-
MGP_LPJ_T0054528	-	2070	-	MGP_LPJ_P0054528	37 (aa)	-	-
MGP_LPJ_T0054529	-	2608	-	-	- (aa)	-	-
MGP_LPJ_T0054508	-	9124	XM_006498042	MGP_LPJ_P0054508	1215 (aa)	XP_006498105	Q9R0G7
MGP_LPJ_T0054509	-	1762	-	MGP_LPJ_P0054509	220 (aa)	-	-
MGP_LPJ_T0054533	-	644	-	-	- (aa)	-	-
MGP_LPJ_T0054532	-	370	-	-	- (aa)	-	-
MGP_LPJ_T0054519	-	453	-	-	- (aa)	-	-
MGP_LPJ_T0054518	-	709	-	MGP_LPJ_P0054518	184 (aa)	-	-
MGP_LPJ_T0054531	-	2989	-	-	- (aa)	-	-
MGP_LPJ_T0054530	-	2690	-	-	- (aa)	-	-
MGP_LPJ_T0054535	-	432	-	-	- (aa)	-	-
MGP_LPJ_T0054534	-	3637	-	-	- (aa)	-	-
MGP_LPJ_T0054511	-	5624	-	MGP_LPJ_P0054511	1215 (aa)	-	-
MGP_LPJ_T0054510	-	5335	-	MGP_LPJ_P0054510	1259 (aa)	-	-
MGP_LPJ_T0054513	-	4020	-	MGP_LPJ_P0054513	1215 (aa)	-	-
MGP_LPJ_T0054512	-	4064	-	MGP_LPJ_P0054512	1191 (aa)	-	-
MGP_LPJ_T0054515	-	2236	-	MGP_LPJ_P0054515	731 (aa)	-	-
MGP_LPJ_T0054514	-	3913	-	MGP_LPJ_P0054514	1214 (aa)	-	-
MGP_LPJ_T0054517	-	240	-	MGP_LPJ_P0054517	79 (aa)	-	-
MGP_LPJ_T0054516	-	868	-	MGP_LPJ_P0054516	214 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0025649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0025649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0025649	Zeb2	97	62.150	MGP_LPJ_G0024040	Zeb1	100	69.340