EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026511 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 9815 bases
Position: chr2:147256960-147266774
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0057849	RRM_5	PF13893.6	8.4e-07	1	2
MGP_LPJ_P0057849	RRM_5	PF13893.6	8.4e-07	2	2
MGP_LPJ_P0057849	RRM_1	PF00076.22	2.9e-25	1	2
MGP_LPJ_P0057849	RRM_1	PF00076.22	2.9e-25	2	2
MGP_LPJ_P0057851	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0057849	-	2061	-	MGP_LPJ_P0057849	225 (aa)	-	Q9CQI7
MGP_LPJ_T0057851	-	636	-	MGP_LPJ_P0057851	143 (aa)	-	-
MGP_LPJ_T0057850	-	686	-	-	- (aa)	-	-
MGP_LPJ_T0057853	-	1827	-	-	- (aa)	-	-
MGP_LPJ_T0057852	-	594	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0026511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026511	Snrpb2	99	63.121	MGP_LPJ_G0031804	Snrpa	92	55.094
MGP_LPJ_G0026511	Snrpb2	99	54.861	MGP_LPJ_G0023123	Gm5145	97	52.347