EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026662 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 82302 bases
Position: chr2:159691560-159773861
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0058370	RRM_1	PF00076.22	1.8e-12	1	1
MGP_LPJ_P0058368	RRM_1	PF00076.22	3.8e-12	1	1
MGP_LPJ_P0058367	RRM_1	PF00076.22	7.2e-12	1	1
MGP_LPJ_P0058372	RRM_1	PF00076.22	7.2e-12	1	1
MGP_LPJ_P0058373	RRM_1	PF00076.22	7.5e-12	1	1
MGP_LPJ_P0058369	RRM_1	PF00076.22	8e-12	1	1
MGP_LPJ_P0058371	RRM_1	PF00076.22	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0058368	-	851	-	MGP_LPJ_P0058368	211 (aa)	-	-
MGP_LPJ_T0058369	-	1759	-	MGP_LPJ_P0058369	312 (aa)	-	-
MGP_LPJ_T0058367	-	1709	XM_006499013	MGP_LPJ_P0058367	296 (aa)	XP_006499076	Q64012
MGP_LPJ_T0058371	-	1802	-	MGP_LPJ_P0058371	312 (aa)	-	-
MGP_LPJ_T0058370	-	546	-	MGP_LPJ_P0058370	141 (aa)	-	-
MGP_LPJ_T0058373	-	1100	-	MGP_LPJ_P0058373	298 (aa)	-	-
MGP_LPJ_T0058372	-	1747	-	MGP_LPJ_P0058372	296 (aa)	-	-
MGP_LPJ_T0058375	-	404	-	-	- (aa)	-	-
MGP_LPJ_T0058374	-	1596	-	-	- (aa)	-	-
MGP_LPJ_T0058377	-	337	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026662	Raly	54	35.526	MGP_LPJ_G0026748	Srsf6	56	35.526
MGP_LPJ_G0026662	Raly	51	32.500	MGP_LPJ_G0035637	Rbmx	77	32.500
MGP_LPJ_G0026662	Raly	72	74.757	MGP_LPJ_G0021194	Hnrnpc	95	53.097