EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026745 (Gene tree)
Gene ID: -
Gene Symbol: Chd6
Alias: 5430439G14Rik|6330406J24Rik|CHD-6|Kiaa1335
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 175112 bases
Position: chr2:166256315-166431426
Accession: 1918639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0058845	ResIII	PF04851.15	4.2e-08	1	1
MGP_LPJ_P0058841	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0058849	-	646	-	-	- (aa)	-	-
MGP_LPJ_T0058848	-	616	-	-	- (aa)	-	-
MGP_LPJ_T0058843	-	764	-	-	- (aa)	-	-
MGP_LPJ_T0058842	-	735	-	-	- (aa)	-	-
MGP_LPJ_T0058841	-	10515	XM_006500181	MGP_LPJ_P0058841	2711 (aa)	XP_011238078	A3KFM7
MGP_LPJ_T0058847	-	3092	-	-	- (aa)	-	-
MGP_LPJ_T0058846	-	601	-	-	- (aa)	-	-
MGP_LPJ_T0058845	-	3608	-	MGP_LPJ_P0058845	1183 (aa)	-	-
MGP_LPJ_T0058844	-	3970	-	-	- (aa)	-	-
MGP_LPJ_T0058850	-	675	-	MGP_LPJ_P0058850	217 (aa)	-	-
MGP_LPJ_T0058851	-	5051	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026745	Chd6	84	72.837	MGP_LPJ_G0027966	Chd7	72	64.905
MGP_LPJ_G0026745	Chd6	61	37.625	MGP_LPJ_G0032275	Chd2	63	32.583
MGP_LPJ_G0026745	Chd6	87	68.979	MGP_LPJ_G0033834	Chd9	72	62.298