EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026840 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 19378 bases
Position: chr2:172739187-172758564
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0059222	ResIII	PF04851.15	1.6e-06	1	1
MGP_LPJ_P0059222	DEAD	PF00270.29	7.1e-45	1	1
MGP_LPJ_P0059223	DEAD	PF00270.29	2.3e-18	1	1
MGP_LPJ_P0059224	DEAD	PF00270.29	5.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0059222	-	2714	XM_006499422	MGP_LPJ_P0059222	760 (aa)	XP_006499485	Q921N6
MGP_LPJ_T0059223	-	2153	-	MGP_LPJ_P0059223	292 (aa)	-	-
MGP_LPJ_T0059224	-	955	-	MGP_LPJ_P0059224	310 (aa)	-	-
MGP_LPJ_T0059225	-	264	-	-	- (aa)	-	-
MGP_LPJ_T0059226	-	649	-	-	- (aa)	-	-
MGP_LPJ_T0059227	-	708	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0026840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026840	Ddx27	56	32.558	MGP_LPJ_G0021977	Ddx17	56	33.880
MGP_LPJ_G0026840	Ddx27	53	31.019	MGP_LPJ_G0017928	Ddx56	98	33.065
MGP_LPJ_G0026840	Ddx27	59	33.696	MGP_LPJ_G0033607	Ddx49	97	38.286
MGP_LPJ_G0026840	Ddx27	52	34.129	MGP_LPJ_G0017215	Ddx50	56	34.272
MGP_LPJ_G0026840	Ddx27	54	32.134	MGP_LPJ_G0023543	Ddx39b	84	32.970
MGP_LPJ_G0026840	Ddx27	51	35.938	MGP_LPJ_G0019952	Ddx24	56	35.938