EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026886 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 12827 bases
Position: chr2:179202470-179215296
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0059400	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0059398	-	936	XM_006499923	MGP_LPJ_P0059398	78 (aa)	XP_006499986	Q62176
MGP_LPJ_T0059399	-	2280	-	-	- (aa)	-	-
MGP_LPJ_T0059400	-	714	-	MGP_LPJ_P0059400	237 (aa)	-	-
MGP_LPJ_T0059401	-	620	-	MGP_LPJ_P0059401	107 (aa)	-	-
MGP_LPJ_T0059402	-	440	-	MGP_LPJ_P0059402	125 (aa)	-	-
MGP_LPJ_T0059403	-	1527	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0026886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026886	Rbm38	77	35.484	MGP_LPJ_G0017404	Dazap1	86	35.802
MGP_LPJ_G0026886	Rbm38	74	38.043	MGP_LPJ_G0017398	Cirbp	78	40.476
MGP_LPJ_G0026886	Rbm38	70	38.095	MGP_LPJ_G0018828	Msi2	80	34.074
MGP_LPJ_G0026886	Rbm38	63	91.837	MGP_LPJ_G0020419	Rbm24	100	68.067
MGP_LPJ_G0026886	Rbm38	66	46.809	MGP_LPJ_G0029870	Msi1	61	51.064