EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0026952 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 7611 bases
Position: chr2:187970770-187978380
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0059699	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0059703	-	434	-	-	- (aa)	-	-
MGP_LPJ_T0059702	-	662	-	MGP_LPJ_P0059702	62 (aa)	-	-
MGP_LPJ_T0059701	-	748	-	-	- (aa)	-	-
MGP_LPJ_T0059700	-	835	-	-	- (aa)	-	-
MGP_LPJ_T0059704	-	555	-	-	- (aa)	-	-
MGP_LPJ_T0059699	-	662	-	MGP_LPJ_P0059699	201 (aa)	-	-
MGP_LPJ_T0059698	-	1087	-	-	- (aa)	-	-
MGP_LPJ_T0059695	-	2318	XM_011239965	MGP_LPJ_P0059695	121 (aa)	XP_011238267	Q8BXL7
MGP_LPJ_T0059697	-	1822	-	-	- (aa)	-	-
MGP_LPJ_T0059696	-	2179	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0026952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0026952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0026952	Arfrp1	93	38.793	MGP_LPJ_G0018302	Arf1	96	33.871
MGP_LPJ_G0026952	Arfrp1	93	31.304	MGP_LPJ_G0031001	Arl8b	74	31.724
MGP_LPJ_G0026952	Arfrp1	87	32.222	MGP_LPJ_G0019111	Arl4d	85	32.222
MGP_LPJ_G0026952	Arfrp1	71	30.070	MGP_LPJ_G0016436	Arl8a	73	30.070
MGP_LPJ_G0026952	Arfrp1	85	34.286	MGP_LPJ_G0016204	Arl4c	86	34.286
MGP_LPJ_G0026952	Arfrp1	91	40.000	MGP_LPJ_G0019602	Arl4a	90	34.896
MGP_LPJ_G0026952	Arfrp1	87	35.185	MGP_LPJ_G0029876	Rab35	59	32.576
MGP_LPJ_G0026952	Arfrp1	87	37.273	MGP_LPJ_G0021345	Arl11	94	34.659
MGP_LPJ_G0026952	Arfrp1	93	33.929	MGP_LPJ_G0022836	Arl6	92	30.387
MGP_LPJ_G0026952	Arfrp1	79	41.837	MGP_LPJ_G0017545	Arl1	98	33.862
MGP_LPJ_G0026952	Arfrp1	84	36.538	MGP_LPJ_G0027230	Arl14	83	35.503
MGP_LPJ_G0026952	Arfrp1	92	40.000	MGP_LPJ_G0025140	Arl3	96	40.000
MGP_LPJ_G0026952	Arfrp1	90	38.393	MGP_LPJ_G0030413	Arf5	94	34.225
MGP_LPJ_G0026952	Arfrp1	93	37.931	MGP_LPJ_G0022209	Arf3	96	33.333
MGP_LPJ_G0026952	Arfrp1	91	38.182	MGP_LPJ_G0024670	Arl2	97	35.106
MGP_LPJ_G0026952	Arfrp1	93	38.938	MGP_LPJ_G0025665	Arl5a	97	38.587
MGP_LPJ_G0026952	Arfrp1	84	40.196	MGP_LPJ_G0025296	Arl5b	92	37.126
MGP_LPJ_G0026952	Arfrp1	93	38.793	MGP_LPJ_G0019172	Arf2	96	33.333