EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0027073 (Gene tree)
Gene ID: -
Gene Symbol: Zmat3
Alias: Wig1
Full Name: zinc finger matrin type 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 32539 bases
Position: chr3:30703184-30735722
Accession: 1195270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0060230	zf-met	PF12874.7	1.6e-23	1	3
MGP_LPJ_P0060230	zf-met	PF12874.7	1.6e-23	2	3
MGP_LPJ_P0060230	zf-met	PF12874.7	1.6e-23	3	3
MGP_LPJ_P0060231	zf-met	PF12874.7	1.6e-23	1	3
MGP_LPJ_P0060231	zf-met	PF12874.7	1.6e-23	2	3
MGP_LPJ_P0060231	zf-met	PF12874.7	1.6e-23	3	3
MGP_LPJ_P0060230	zf-C2H2_jaz	PF12171.8	3.7e-21	1	3
MGP_LPJ_P0060230	zf-C2H2_jaz	PF12171.8	3.7e-21	2	3
MGP_LPJ_P0060230	zf-C2H2_jaz	PF12171.8	3.7e-21	3	3
MGP_LPJ_P0060231	zf-C2H2_jaz	PF12171.8	3.7e-21	1	3
MGP_LPJ_P0060231	zf-C2H2_jaz	PF12171.8	3.7e-21	2	3
MGP_LPJ_P0060231	zf-C2H2_jaz	PF12171.8	3.7e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0060233	-	3824	-	-	- (aa)	-	-
MGP_LPJ_T0060232	-	440	-	MGP_LPJ_P0060232	29 (aa)	-	-
MGP_LPJ_T0060231	-	7668	-	MGP_LPJ_P0060231	290 (aa)	-	-
MGP_LPJ_T0060230	-	7767	XM_006535441	MGP_LPJ_P0060230	290 (aa)	XP_006535504	A0A0A6YWE0

Gene Model

Click here to download MGP_LPJ_G0027073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0027073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027073	Zmat3	74	35.172	MGP_LPJ_G0033376	Zmat4	84	35.172