EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0027478 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 19160 bases
Position: chr3:96295070-96314229
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0062057	KH_1	PF00013.29	1.9e-34	1	2
MGP_LPJ_P0062057	KH_1	PF00013.29	1.9e-34	2	2
MGP_LPJ_P0062055	KH_1	PF00013.29	1.2e-33	1	2
MGP_LPJ_P0062055	KH_1	PF00013.29	1.2e-33	2	2
MGP_LPJ_P0062059	KH_1	PF00013.29	5.8e-28	1	2
MGP_LPJ_P0062059	KH_1	PF00013.29	5.8e-28	2	2
MGP_LPJ_P0062058	KH_1	PF00013.29	3e-19	1	1
MGP_LPJ_P0062058	TUDOR	PF00567.24	4.7e-29	1	1
MGP_LPJ_P0062059	TUDOR	PF00567.24	5.3e-29	1	1
MGP_LPJ_P0062055	TUDOR	PF00567.24	5.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0062059	-	2588	-	MGP_LPJ_P0062059	556 (aa)	-	-
MGP_LPJ_T0062058	-	2478	-	MGP_LPJ_P0062058	515 (aa)	-	-
MGP_LPJ_T0062055	-	3648	XM_006502138	MGP_LPJ_P0062055	560 (aa)	XP_006502201	Q80VL1
MGP_LPJ_T0062057	-	1050	-	MGP_LPJ_P0062057	296 (aa)	-	-
MGP_LPJ_T0062056	-	476	-	MGP_LPJ_P0062056	50 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0027478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027478	Tdrkh	74	31.707	MGP_LPJ_G0025517	Fubp3	79	31.707
MGP_LPJ_G0027478	Tdrkh	52	30.625	MGP_LPJ_G0030624	Igf2bp3	55	30.625