EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0027482 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 14882 bases
Position: chr3:96364162-96379043
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0062076	RRM_1	PF00076.22	9.3e-54	1	3
MGP_LPJ_P0062076	RRM_1	PF00076.22	9.3e-54	2	3
MGP_LPJ_P0062076	RRM_1	PF00076.22	9.3e-54	3	3
MGP_LPJ_P0062075	RRM_1	PF00076.22	1.5e-53	1	3
MGP_LPJ_P0062075	RRM_1	PF00076.22	1.5e-53	2	3
MGP_LPJ_P0062075	RRM_1	PF00076.22	1.5e-53	3	3
MGP_LPJ_P0062077	RRM_1	PF00076.22	2e-53	1	3
MGP_LPJ_P0062077	RRM_1	PF00076.22	2e-53	2	3
MGP_LPJ_P0062077	RRM_1	PF00076.22	2e-53	3	3
MGP_LPJ_P0062082	RRM_1	PF00076.22	6.9e-16	1	1
MGP_LPJ_P0062083	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0062082	-	779	-	MGP_LPJ_P0062082	182 (aa)	-	-
MGP_LPJ_T0062083	-	726	-	MGP_LPJ_P0062083	231 (aa)	-	-
MGP_LPJ_T0062079	-	669	-	-	- (aa)	-	-
MGP_LPJ_T0062078	-	1193	-	-	- (aa)	-	-
MGP_LPJ_T0062086	-	855	-	-	- (aa)	-	-
MGP_LPJ_T0062084	-	3370	-	-	- (aa)	-	-
MGP_LPJ_T0062085	-	889	-	-	- (aa)	-	-
MGP_LPJ_T0062077	-	3419	-	MGP_LPJ_P0062077	494 (aa)	-	-
MGP_LPJ_T0062076	-	2354	-	MGP_LPJ_P0062076	416 (aa)	-	-
MGP_LPJ_T0062075	-	2747	-	MGP_LPJ_P0062075	465 (aa)	-	-
MGP_LPJ_T0062074	-	314	XM_006502323	MGP_LPJ_P0062074	31 (aa)	XP_006502386	Q8CIN6
MGP_LPJ_T0062081	-	2935	-	-	- (aa)	-	-
MGP_LPJ_T0062080	-	2444	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0027482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0027482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027482	Celf3	76	38.462	MGP_LPJ_G0030871	Tia1	93	38.667
MGP_LPJ_G0027482	Celf3	81	87.368	MGP_LPJ_G0034798	Celf6	75	85.526
MGP_LPJ_G0027482	Celf3	99	45.783	MGP_LPJ_G0025262	Celf2	94	83.333
MGP_LPJ_G0027482	Celf3	67	32.857	MGP_LPJ_G0026769	Pabpc1l	57	34.118
MGP_LPJ_G0027482	Celf3	98	35.632	MGP_LPJ_G0033249	Elavl1	95	44.444
MGP_LPJ_G0027482	Celf3	61	40.741	MGP_LPJ_G0028490	Elavl4	85	40.741
MGP_LPJ_G0027482	Celf3	63	41.975	MGP_LPJ_G0028358	Elavl2	76	41.975
MGP_LPJ_G0027482	Celf3	100	66.848	MGP_LPJ_G0017472	Celf5	93	76.744
MGP_LPJ_G0027482	Celf3	70	34.091	MGP_LPJ_G0032999	Tial1	81	37.333
MGP_LPJ_G0027482	Celf3	80	37.500	MGP_LPJ_G0023047	Pabpc6	72	36.585
MGP_LPJ_G0027482	Celf3	100	69.072	MGP_LPJ_G0024123	Celf4	97	65.971
MGP_LPJ_G0027482	Celf3	94	40.278	MGP_LPJ_G0035290	Rbms3	81	39.474
MGP_LPJ_G0027482	Celf3	98	35.632	MGP_LPJ_G0034372	Elavl3	89	34.940
MGP_LPJ_G0027482	Celf3	99	43.830	MGP_LPJ_G0026076	Celf1	97	43.320