EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0027753 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp2
Alias: Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name: polypyrimidine tract binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 68785 bases
Position: chr3:123369822-123438606
Accession: 1860489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0063306	RRM_5	PF13893.6	3.4e-53	1	3
MGP_LPJ_P0063306	RRM_5	PF13893.6	3.4e-53	2	3
MGP_LPJ_P0063306	RRM_5	PF13893.6	3.4e-53	3	3
MGP_LPJ_P0063307	RRM_5	PF13893.6	4e-52	1	2
MGP_LPJ_P0063307	RRM_5	PF13893.6	4e-52	2	2
MGP_LPJ_P0063312	RRM_5	PF13893.6	3.4e-20	1	1
MGP_LPJ_P0063307	RRM_1	PF00076.22	5.9e-33	1	3
MGP_LPJ_P0063307	RRM_1	PF00076.22	5.9e-33	2	3
MGP_LPJ_P0063307	RRM_1	PF00076.22	5.9e-33	3	3
MGP_LPJ_P0063306	RRM_1	PF00076.22	2e-32	1	3
MGP_LPJ_P0063306	RRM_1	PF00076.22	2e-32	2	3
MGP_LPJ_P0063306	RRM_1	PF00076.22	2e-32	3	3
MGP_LPJ_P0063314	RRM_1	PF00076.22	2.5e-10	1	1
MGP_LPJ_P0063312	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0063311	-	491	-	-	- (aa)	-	-
MGP_LPJ_T0063310	-	937	-	-	- (aa)	-	-
MGP_LPJ_T0063313	-	4048	-	-	- (aa)	-	-
MGP_LPJ_T0063312	-	465	-	MGP_LPJ_P0063312	155 (aa)	-	-
MGP_LPJ_T0063315	-	654	-	-	- (aa)	-	-
MGP_LPJ_T0063314	-	1742	-	MGP_LPJ_P0063314	241 (aa)	-	-
MGP_LPJ_T0063317	-	454	-	-	- (aa)	-	-
MGP_LPJ_T0063316	-	478	-	-	- (aa)	-	-
MGP_LPJ_T0063318	-	389	-	MGP_LPJ_P0063318	49 (aa)	-	-
MGP_LPJ_T0063308	-	1598	-	MGP_LPJ_P0063308	356 (aa)	-	-
MGP_LPJ_T0063309	-	576	-	MGP_LPJ_P0063309	33 (aa)	-	-
MGP_LPJ_T0063306	-	3364	XM_006501731	MGP_LPJ_P0063306	532 (aa)	XP_006501794	Q91Z31
MGP_LPJ_T0063307	-	3777	-	MGP_LPJ_P0063307	531 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0027753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027753	Ptbp2	77	30.645	MGP_LPJ_G0031864	Hnrnpl	77	30.645
MGP_LPJ_G0027753	Ptbp2	100	72.903	MGP_LPJ_G0017375	Ptbp1	100	73.048
MGP_LPJ_G0027753	Ptbp2	99	69.835	MGP_LPJ_G0028251	Ptbp3	91	78.195
MGP_LPJ_G0027753	Ptbp2	99	30.357	MGP_LPJ_G0023964	Hnrnpll	57	30.000