EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0027915 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 26285 bases
Position: chr3:157438803-157465087
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0064176	KH_1	PF00013.29	7.1e-70	1	4
MGP_LPJ_P0064176	KH_1	PF00013.29	7.1e-70	2	4
MGP_LPJ_P0064176	KH_1	PF00013.29	7.1e-70	3	4
MGP_LPJ_P0064176	KH_1	PF00013.29	7.1e-70	4	4
MGP_LPJ_P0064173	KH_1	PF00013.29	2.2e-69	1	4
MGP_LPJ_P0064173	KH_1	PF00013.29	2.2e-69	2	4
MGP_LPJ_P0064173	KH_1	PF00013.29	2.2e-69	3	4
MGP_LPJ_P0064173	KH_1	PF00013.29	2.2e-69	4	4
MGP_LPJ_P0064179	KH_1	PF00013.29	2.2e-69	1	4
MGP_LPJ_P0064179	KH_1	PF00013.29	2.2e-69	2	4
MGP_LPJ_P0064179	KH_1	PF00013.29	2.2e-69	3	4
MGP_LPJ_P0064179	KH_1	PF00013.29	2.2e-69	4	4
MGP_LPJ_P0064177	KH_1	PF00013.29	2.4e-69	1	4
MGP_LPJ_P0064177	KH_1	PF00013.29	2.4e-69	2	4
MGP_LPJ_P0064177	KH_1	PF00013.29	2.4e-69	3	4
MGP_LPJ_P0064177	KH_1	PF00013.29	2.4e-69	4	4
MGP_LPJ_P0064175	KH_1	PF00013.29	2.4e-69	1	4
MGP_LPJ_P0064175	KH_1	PF00013.29	2.4e-69	2	4
MGP_LPJ_P0064175	KH_1	PF00013.29	2.4e-69	3	4
MGP_LPJ_P0064175	KH_1	PF00013.29	2.4e-69	4	4
MGP_LPJ_P0064174	KH_1	PF00013.29	7.6e-38	1	2
MGP_LPJ_P0064174	KH_1	PF00013.29	7.6e-38	2	2
MGP_LPJ_P0064183	KH_1	PF00013.29	1.1e-16	1	1
MGP_LPJ_P0064176	KH_2	PF07650.17	1.3e-22	1	2
MGP_LPJ_P0064176	KH_2	PF07650.17	1.3e-22	2	2
MGP_LPJ_P0064179	KH_2	PF07650.17	3.3e-22	1	2
MGP_LPJ_P0064179	KH_2	PF07650.17	3.3e-22	2	2
MGP_LPJ_P0064177	KH_2	PF07650.17	3.5e-22	1	2
MGP_LPJ_P0064177	KH_2	PF07650.17	3.5e-22	2	2
MGP_LPJ_P0064175	KH_2	PF07650.17	3.6e-22	1	2
MGP_LPJ_P0064175	KH_2	PF07650.17	3.6e-22	2	2
MGP_LPJ_P0064173	KH_2	PF07650.17	3.7e-22	1	2
MGP_LPJ_P0064173	KH_2	PF07650.17	3.7e-22	2	2
MGP_LPJ_P0064174	KH_2	PF07650.17	3.8e-10	1	1
MGP_LPJ_P0064183	KH_2	PF07650.17	5.2e-06	1	1
MGP_LPJ_P0064187	DUF1897	PF09005.10	1.7e-12	1	2
MGP_LPJ_P0064187	DUF1897	PF09005.10	1.7e-12	2	2
MGP_LPJ_P0064185	DUF1897	PF09005.10	2.1e-12	1	2
MGP_LPJ_P0064185	DUF1897	PF09005.10	2.1e-12	2	2
MGP_LPJ_P0064173	DUF1897	PF09005.10	2.4e-11	1	2
MGP_LPJ_P0064173	DUF1897	PF09005.10	2.4e-11	2	2
MGP_LPJ_P0064179	DUF1897	PF09005.10	2.4e-11	1	2
MGP_LPJ_P0064179	DUF1897	PF09005.10	2.4e-11	2	2
MGP_LPJ_P0064177	DUF1897	PF09005.10	2.5e-11	1	2
MGP_LPJ_P0064177	DUF1897	PF09005.10	2.5e-11	2	2
MGP_LPJ_P0064175	DUF1897	PF09005.10	2.6e-11	1	2
MGP_LPJ_P0064175	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0064174	-	1040	-	MGP_LPJ_P0064174	306 (aa)	-	-
MGP_LPJ_T0064175	-	2552	-	MGP_LPJ_P0064175	654 (aa)	-	-
MGP_LPJ_T0064176	-	3194	-	MGP_LPJ_P0064176	523 (aa)	-	-
MGP_LPJ_T0064177	-	2526	-	MGP_LPJ_P0064177	651 (aa)	-	-
MGP_LPJ_T0064190	-	3921	-	-	- (aa)	-	-
MGP_LPJ_T0064173	-	6547	XM_006501660	MGP_LPJ_P0064173	642 (aa)	XP_006501723	Q91WJ8
MGP_LPJ_T0064181	-	4525	-	MGP_LPJ_P0064181	642 (aa)	-	-
MGP_LPJ_T0064180	-	4853	-	MGP_LPJ_P0064180	700 (aa)	-	-
MGP_LPJ_T0064183	-	585	-	MGP_LPJ_P0064183	149 (aa)	-	-
MGP_LPJ_T0064182	-	435	-	-	- (aa)	-	-
MGP_LPJ_T0064178	-	2083	-	MGP_LPJ_P0064178	69 (aa)	-	-
MGP_LPJ_T0064179	-	2374	-	MGP_LPJ_P0064179	643 (aa)	-	-
MGP_LPJ_T0064187	-	830	-	MGP_LPJ_P0064187	156 (aa)	-	-
MGP_LPJ_T0064184	-	512	-	-	- (aa)	-	-
MGP_LPJ_T0064191	-	665	-	-	- (aa)	-	-
MGP_LPJ_T0064188	-	5101	-	-	- (aa)	-	-
MGP_LPJ_T0064189	-	424	-	-	- (aa)	-	-
MGP_LPJ_T0064186	-	800	-	MGP_LPJ_P0064186	173 (aa)	-	-
MGP_LPJ_T0064185	-	796	-	MGP_LPJ_P0064185	141 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0027915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027915	Fubp1	73	34.615	MGP_LPJ_G0020541	Hnrnpk	63	34.615
MGP_LPJ_G0027915	Fubp1	50	36.364	MGP_LPJ_G0019615	Nova1	57	36.364
MGP_LPJ_G0027915	Fubp1	96	64.410	MGP_LPJ_G0023858	Khsrp	55	67.654
MGP_LPJ_G0027915	Fubp1	61	36.765	MGP_LPJ_G0031652	-	54	36.765
MGP_LPJ_G0027915	Fubp1	61	36.765	MGP_LPJ_G0031651	-	53	36.765
MGP_LPJ_G0027915	Fubp1	72	33.019	MGP_LPJ_G0017301	Pcbp3	66	31.250
MGP_LPJ_G0027915	Fubp1	94	59.208	MGP_LPJ_G0025517	Fubp3	96	64.324
MGP_LPJ_G0027915	Fubp1	72	34.524	MGP_LPJ_G0035120	-	76	33.684