EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0027966 (Gene tree)
Gene ID: -
Gene Symbol: Chd7
Alias: A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 183321 bases
Position: chr4:5285992-5469312
Accession: 2444748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0064486	ResIII	PF04851.15	4.5e-06	1	1
MGP_LPJ_P0064487	ResIII	PF04851.15	4.5e-06	1	1
MGP_LPJ_P0064486	BRK	PF07533.16	4.7e-37	1	2
MGP_LPJ_P0064486	BRK	PF07533.16	4.7e-37	2	2
MGP_LPJ_P0064487	BRK	PF07533.16	4.7e-37	1	2
MGP_LPJ_P0064487	BRK	PF07533.16	4.7e-37	2	2
MGP_LPJ_P0064489	BRK	PF07533.16	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0064484	-	4942	-	-	- (aa)	-	-
MGP_LPJ_T0064485	-	2370	-	MGP_LPJ_P0064485	631 (aa)	-	-
MGP_LPJ_T0064486	-	9445	-	MGP_LPJ_P0064486	2986 (aa)	-	-
MGP_LPJ_T0064487	-	10216	-	MGP_LPJ_P0064487	2986 (aa)	-	-
MGP_LPJ_T0064491	-	741	-	-	- (aa)	-	-
MGP_LPJ_T0064490	-	8958	-	MGP_LPJ_P0064490	2985 (aa)	-	-
MGP_LPJ_T0064488	-	458	-	MGP_LPJ_P0064488	19 (aa)	-	-
MGP_LPJ_T0064489	-	3463	-	MGP_LPJ_P0064489	941 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0027966	Chd7	94	54.334	MGP_LPJ_G0033834	Chd9	83	69.649
MGP_LPJ_G0027966	Chd7	72	64.905	MGP_LPJ_G0026745	Chd6	84	72.837