EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0028358 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 156944 bases
Position: chr4:91533827-91690770
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0066139	RRM_5	PF13893.6	1.3e-12	1	2
MGP_LPJ_P0066139	RRM_5	PF13893.6	1.3e-12	2	2
MGP_LPJ_P0066140	RRM_5	PF13893.6	1.4e-12	1	2
MGP_LPJ_P0066140	RRM_5	PF13893.6	1.4e-12	2	2
MGP_LPJ_P0066137	RRM_5	PF13893.6	1.7e-12	1	2
MGP_LPJ_P0066137	RRM_5	PF13893.6	1.7e-12	2	2
MGP_LPJ_P0066138	RRM_5	PF13893.6	1.9e-12	1	2
MGP_LPJ_P0066138	RRM_5	PF13893.6	1.9e-12	2	2
MGP_LPJ_P0066143	RRM_5	PF13893.6	2.1e-12	1	2
MGP_LPJ_P0066143	RRM_5	PF13893.6	2.1e-12	2	2
MGP_LPJ_P0066142	RRM_5	PF13893.6	2.2e-12	1	2
MGP_LPJ_P0066142	RRM_5	PF13893.6	2.2e-12	2	2
MGP_LPJ_P0066139	RRM_1	PF00076.22	1.2e-66	1	3
MGP_LPJ_P0066139	RRM_1	PF00076.22	1.2e-66	2	3
MGP_LPJ_P0066139	RRM_1	PF00076.22	1.2e-66	3	3
MGP_LPJ_P0066140	RRM_1	PF00076.22	1.4e-66	1	3
MGP_LPJ_P0066140	RRM_1	PF00076.22	1.4e-66	2	3
MGP_LPJ_P0066140	RRM_1	PF00076.22	1.4e-66	3	3
MGP_LPJ_P0066137	RRM_1	PF00076.22	1.6e-66	1	3
MGP_LPJ_P0066137	RRM_1	PF00076.22	1.6e-66	2	3
MGP_LPJ_P0066137	RRM_1	PF00076.22	1.6e-66	3	3
MGP_LPJ_P0066138	RRM_1	PF00076.22	1.7e-66	1	3
MGP_LPJ_P0066138	RRM_1	PF00076.22	1.7e-66	2	3
MGP_LPJ_P0066138	RRM_1	PF00076.22	1.7e-66	3	3
MGP_LPJ_P0066142	RRM_1	PF00076.22	2e-66	1	3
MGP_LPJ_P0066142	RRM_1	PF00076.22	2e-66	2	3
MGP_LPJ_P0066142	RRM_1	PF00076.22	2e-66	3	3
MGP_LPJ_P0066143	RRM_1	PF00076.22	2e-66	1	3
MGP_LPJ_P0066143	RRM_1	PF00076.22	2e-66	2	3
MGP_LPJ_P0066143	RRM_1	PF00076.22	2e-66	3	3
MGP_LPJ_P0066145	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0066149	-	415	-	-	- (aa)	-	-
MGP_LPJ_T0066148	-	450	-	-	- (aa)	-	-
MGP_LPJ_T0066143	-	1282	-	MGP_LPJ_P0066143	389 (aa)	-	-
MGP_LPJ_T0066142	-	1167	-	MGP_LPJ_P0066142	388 (aa)	-	-
MGP_LPJ_T0066141	-	930	-	-	- (aa)	-	-
MGP_LPJ_T0066140	-	3730	-	MGP_LPJ_P0066140	360 (aa)	-	-
MGP_LPJ_T0066147	-	511	-	MGP_LPJ_P0066147	23 (aa)	-	-
MGP_LPJ_T0066146	-	408	-	MGP_LPJ_P0066146	83 (aa)	-	-
MGP_LPJ_T0066145	-	425	-	MGP_LPJ_P0066145	125 (aa)	-	-
MGP_LPJ_T0066144	-	3192	-	-	- (aa)	-	-
MGP_LPJ_T0066138	-	3797	-	MGP_LPJ_P0066138	376 (aa)	-	-
MGP_LPJ_T0066139	-	3671	-	MGP_LPJ_P0066139	347 (aa)	-	-
MGP_LPJ_T0066137	-	3840	XM_006502778	MGP_LPJ_P0066137	373 (aa)	XP_006502841	Q60899

Gene Model

Click here to download MGP_LPJ_G0028358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0028358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0028358	Elavl2	67	35.714	MGP_LPJ_G0029999	Snrnp35	60	37.500
MGP_LPJ_G0028358	Elavl2	78	40.741	MGP_LPJ_G0034798	Celf6	89	37.037
MGP_LPJ_G0028358	Elavl2	72	32.632	MGP_LPJ_G0018828	Msi2	70	31.250
MGP_LPJ_G0028358	Elavl2	88	39.506	MGP_LPJ_G0024123	Celf4	91	37.037
MGP_LPJ_G0028358	Elavl2	100	89.751	MGP_LPJ_G0028490	Elavl4	99	89.315
MGP_LPJ_G0028358	Elavl2	59	33.784	MGP_LPJ_G0027551	Rbm8a	58	32.353
MGP_LPJ_G0028358	Elavl2	73	34.831	MGP_LPJ_G0035637	Rbmx	86	34.831
MGP_LPJ_G0028358	Elavl2	89	34.940	MGP_LPJ_G0027128	Pabpc4l	96	34.940
MGP_LPJ_G0028358	Elavl2	89	37.349	MGP_LPJ_G0021700	Pabpc1	58	37.349
MGP_LPJ_G0028358	Elavl2	89	36.145	MGP_LPJ_G0024286	Pabpc2	59	36.145
MGP_LPJ_G0028358	Elavl2	64	37.500	MGP_LPJ_G0017398	Cirbp	76	37.500
MGP_LPJ_G0028358	Elavl2	96	34.615	MGP_LPJ_G0030871	Tia1	89	34.615
MGP_LPJ_G0028358	Elavl2	100	79.292	MGP_LPJ_G0034372	Elavl3	100	78.400
MGP_LPJ_G0028358	Elavl2	92	40.541	MGP_LPJ_G0026697	Rbm39	71	40.000
MGP_LPJ_G0028358	Elavl2	93	34.615	MGP_LPJ_G0032999	Tial1	72	34.615
MGP_LPJ_G0028358	Elavl2	69	37.209	MGP_LPJ_G0035290	Rbms3	83	37.222
MGP_LPJ_G0028358	Elavl2	63	32.911	MGP_LPJ_G0035427	Rbm3	82	38.710
MGP_LPJ_G0028358	Elavl2	66	30.952	MGP_LPJ_G0028780	Trnau1ap	98	30.952
MGP_LPJ_G0028358	Elavl2	83	39.506	MGP_LPJ_G0025262	Celf2	87	33.333
MGP_LPJ_G0028358	Elavl2	92	34.940	MGP_LPJ_G0026769	Pabpc1l	64	34.940
MGP_LPJ_G0028358	Elavl2	76	41.975	MGP_LPJ_G0027482	Celf3	63	41.975
MGP_LPJ_G0028358	Elavl2	60	41.558	MGP_LPJ_G0025695	Rbms1	51	37.209
MGP_LPJ_G0028358	Elavl2	89	76.375	MGP_LPJ_G0033249	Elavl1	94	76.375
MGP_LPJ_G0028358	Elavl2	90	37.349	MGP_LPJ_G0023047	Pabpc6	60	37.349
MGP_LPJ_G0028358	Elavl2	85	41.975	MGP_LPJ_G0026076	Celf1	69	41.975
MGP_LPJ_G0028358	Elavl2	89	37.037	MGP_LPJ_G0035943	Pabpc5	94	37.037
MGP_LPJ_G0028358	Elavl2	97	30.857	MGP_LPJ_G0017472	Celf5	97	30.857